RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
SS18L1-205ENST00000492466 FDXACB1Q9BRP7 624 aaPredicted RBP16.31■□□□□ 0.2
SS18L1-205ENST00000492466 PHF7Q9BWX1 381 aaPredicted RBP16.31■□□□□ 0.2
SS18L1-205ENST00000492466 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 VWA3AA6NCI4 1184 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 GAS2O43903 313 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 USO1O60763 962 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 SLITRK3O94933 977 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 PHKA2P46019 1235 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 BECN1Q14457 450 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 KSR1Q8IVT5 923 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 RNF169Q8NCN4 708 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 PIGOQ8TEQ8 1089 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 TCP11Q8WWU5 503 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 PSPC1Q8WXF1 523 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
SS18L1-205ENST00000492466 SUCLA2Q9P2R7 463 aaPredicted RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 PUF60Q9UHX1 559 aaKnown RBP16.3■□□□□ 0.2
SS18L1-205ENST00000492466 MED24O75448 989 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 PPM1AP35813 382 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 ATP2C1P98194 919 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-205ENST00000492466 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 ANKRD54Q6NXT1 300 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 TMEM173Q86WV6 379 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-205ENST00000492466 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
SS18L1-205ENST00000492466 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 NACC1Q96RE7 527 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
SS18L1-205ENST00000492466 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 ANKEF1Q9NU02 776 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
SS18L1-205ENST00000492466 MYH11P35749 1972 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 C2orf71A6NGG8 1288 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 MEIS3P2A8K0S8 358 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 NT5C1B-RDH14C9J2C7 533 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 ZBTB39O15060 712 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 LYPLA2O95372 231 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 RPA1P27694 616 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
SS18L1-205ENST00000492466 RESTQ13127 1097 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 BMP8AQ7Z5Y6 402 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 ZNF410Q86VK4 478 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 CATSPER3Q86XQ3 398 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
SS18L1-205ENST00000492466 ENTPD7Q9NQZ7 604 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 COL4A3BPQ9Y5P4 624 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 ZDBF2Q9HCK1 2354 aa16.28■□□□□ 0.2
SS18L1-205ENST00000492466 A0A087WWV3 80 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 ZNF623O75123 536 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 DGAT1O75907 488 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
SS18L1-205ENST00000492466 BCAR1P56945 870 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 ZXDAP98168 799 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 KRT17Q04695 432 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 PDIA5Q14554 519 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
SS18L1-205ENST00000492466 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
SS18L1-205ENST00000492466 TRIM67Q6ZTA4 783 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 TMC7Q7Z402 723 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 LPPQ93052 612 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 RPGRIP1Q96KN7 1286 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.2
SS18L1-205ENST00000492466 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.2
SS18L1-205ENST00000492466 CDH22Q9UJ99 828 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
SS18L1-205ENST00000492466 VPS13AQ96RL7 3174 aa16.27■□□□□ 0.19
SS18L1-205ENST00000492466 B4GALT3O60512 393 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
SS18L1-205ENST00000492466 SPATA31C1P0DKV0 1188 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 RARRES1P49788 294 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 TFDP1Q14186 410 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 LONRF3Q496Y0 759 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 LLGL2Q6P1M3 1020 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 MAEAQ7L5Y9 396 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 BCL7CQ8WUZ0 217 aaPredicted RBP16.26■□□□□ 0.19
SS18L1-205ENST00000492466 APOL5Q9BWW9 433 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 MRPL9Q9BYD2 267 aaKnown RBP16.26■□□□□ 0.19
SS18L1-205ENST00000492466 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
SS18L1-205ENST00000492466 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 FAM105AQ9NUU6 356 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
SS18L1-205ENST00000492466 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
SS18L1-205ENST00000492466 OFD1O75665 1012 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms