RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CTSAP10619 480 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 RARRES1P49788 294 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 AFF1P51825 1210 aaKnown RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 ORC2Q13416 577 aaPredicted RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 GIT2Q14161 759 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 CALCRLQ16602 461 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 XKR9Q5GH70 373 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 PLPP4Q5VZY2 271 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 NCAPH2Q6IBW4 605 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 TMC7Q7Z402 723 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 ZNF280BQ86YH2 543 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 TPH2Q8IWU9 490 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 RNF168Q8IYW5 571 aaPredicted RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 VPS52Q8N1B4 723 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 RNF169Q8NCN4 708 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 CNNM3Q8NE01 707 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 SLC22A17Q8WUG5 538 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 CCDC51Q96ER9 411 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 MTRQ99707 1265 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 POLR3CQ9BUI4 534 aaPredicted RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 ZBP1Q9H171 429 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 ADAM7Q9H2U9 754 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 KANSL3Q9P2N6 904 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 STK39Q9UEW8 545 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 MUTYHQ9UIF7 546 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 LIMCH1Q9UPQ0 1083 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 HCN4Q9Y3Q4 1203 aa9.34□□□□□ -0.91
SMARCB1-207ENST00000491967 CNTNAP2Q9UHC6 1331 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TDRD15B5MCY1 1934 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 A0A1B0GUA9 196 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 NEMFO60524 1076 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TSPAN1O60635 241 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DDHD2O94830 711 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 CSPG5O95196 566 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 CXCL14O95715 111 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 GLRA2P23416 452 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TECP42680 631 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 SLC11A1P49279 550 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 CYP4A11Q02928 519 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 MBTD1Q05BQ5 628 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 ITIH3Q06033 890 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DSC1Q08554 894 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 C4orf32Q8N8J7 132 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 GSTCDQ8NEC7 633 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 FBXO18Q8NFZ0 1043 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 ASAP3Q8TDY4 903 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 CASP10Q92851 521 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TMEM169Q96HH4 297 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 UBN1Q9NPG3 1134 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 ENTPD7Q9NQZ7 604 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DNAJB4Q9UDY4 337 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DBR1Q9UK59 544 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 HCFC2Q9Y5Z7 792 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 ZMYM2Q9UBW7 1377 aa9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 MTCL1Q9Y4B5 1905 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-207ENST00000491967 DENND4AQ7Z401 1863 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 NT5C1B-RDH14C9J2C7 533 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 MARCH6O60337 910 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 C1RP00736 705 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 SRGAP2BP0DMP2 458 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 MUTP22033 750 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 RPA1P27694 616 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 TXKP42681 527 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 ZXDAP98168 799 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 CAPSQ13938 189 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 TFDP1Q14186 410 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 PTPN14Q15678 1187 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 FAM187BQ17R55 369 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 NOTUMQ6P988 496 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 TRIM67Q6ZTA4 783 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 HFE2Q6ZVN8 426 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 COLGALT2Q8IYK4 626 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 GPR65Q8IYL9 337 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 NECTIN4Q96NY8 510 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 CSRNP2Q9H175 543 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 RNF39Q9H2S5 420 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 FZD8Q9H461 694 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 RSAD1Q9HA92 442 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 IPPQ9Y573 584 aa9.32□□□□□ -0.92
SMARCB1-207ENST00000491967 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 POTEMA6NI47 508 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 MED24O75448 989 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 ALDH2P05091 517 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 ARF4P18085 180 aaPredicted RBP9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 TRAPPC10P48553 1259 aa9.31□□□□□ -0.92
SMARCB1-207ENST00000491967 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms