RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 AXDND1Q5T1B0 1012 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 KCNK18Q7Z418 384 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SPRED2Q7Z698 418 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 MYOCDQ8IZQ8 938 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SNX29Q8TEQ0 813 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 PRPF31Q8WWY3 499 aaKnown RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 TIFAQ96CG3 184 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 FDXACB1Q9BRP7 624 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 ZNF446Q9NWS9 450 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 EFCAB14O75071 495 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 GJB5O95377 273 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SERPINC1P01008 464 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 TPM1P09493 284 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SYKP43405 635 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 UBASH3AP57075 661 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 MYL5Q02045 173 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SLC39A14Q15043 492 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 ARL6IP4Q66PJ3 421 aaKnown RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 MNS1Q8NEH6 495 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 SLC7A3Q8WY07 619 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 TOP1MTQ969P6 601 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 MTRQ99707 1265 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 MTMR10Q9NXD2 777 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 DNAI1Q9UI46 699 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 DBR1Q9UK59 544 aaKnown RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 KIAA1024Q9UPX6 916 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 PPME1Q9Y570 386 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 CHD7Q9P2D1 2997 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 E9PMD0 336 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 ZSCAN12O43309 604 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 UPP2O95045 317 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 AMHP03971 560 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 CA3P07451 260 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 DARSP14868 501 aaKnown RBP10.35□□□□□ -0.75
BRCA1-219ENST00000491747 EIF4BP23588 611 aaKnown RBP10.35□□□□□ -0.75
BRCA1-219ENST00000491747 DNM2P50570 870 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 CLCN6P51797 869 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 RAB30Q15771 203 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 ZNF697Q5TEC3 545 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 HAUS3Q68CZ6 603 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 TMCO3Q6UWJ1 677 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 CRIPAKQ8N1N5 446 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 ZNF576Q9H609 170 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 NLRC5Q86WI3 1866 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
BRCA1-219ENST00000491747 TLL1O43897 1013 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 PPP6R2O75170 966 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 MUTP22033 750 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 LAMTOR4Q0VGL1 99 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 DSC3Q14574 896 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 MAEAQ7L5Y9 396 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 LRRC15Q8TF66 581 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 PLIN2Q99541 437 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 GPRC5CQ9NQ84 441 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 COL4A3BPQ9Y5P4 624 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 FNDC1Q4ZHG4 1894 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 GOLGA6L9A6NEM1 432 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 GPR182O15218 404 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 DGAT1O75907 488 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 SRGAP2CP0DJJ0 459 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 ARL2P36404 184 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 HTRA4P83105 476 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 GRB10Q13322 594 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 KRT79Q5XKE5 535 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 FBXO2Q9UK22 296 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-219ENST00000491747 FHOD1Q9Y613 1164 aa10.34□□□□□ -0.75
BRCA1-219ENST00000491747 COL4A4P53420 1690 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 EFCAB8A8MWE9 144 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 ARHGAP6O43182 974 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 PNMA6AP0CW24 399 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-219ENST00000491747 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 GLRA2P23416 452 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 TAP1Q03518 808 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 HYIQ5T013 277 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 USP49Q70CQ1 688 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 ZNF410Q86VK4 478 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 EXOC8Q8IYI6 725 aa10.33□□□□□ -0.76
BRCA1-219ENST00000491747 TCP11Q8WWU5 503 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms