RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 IL9P15248 144 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 RPA1P27694 616 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 IRS1P35568 1242 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 STAT6P42226 847 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 FAM189BP81408 668 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 RBM23Q86U06 439 aaKnown RBP15.12■□□□□ 0.01
CDK9-204ENST00000491521 CATSPER3Q86XQ3 398 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 IQUBQ8NA54 791 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 NEK9Q8TD19 979 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 MICAL1Q8TDZ2 1067 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 P2RX5Q93086 422 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 POLR3CQ9BUI4 534 aaPredicted RBP15.12■□□□□ 0.01
CDK9-204ENST00000491521 TUFT1Q9NNX1 390 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 AAASQ9NRG9 546 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 IGKV6-21A0A0C4DH24 114 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 FAM237AA0A1B0GTK4 181 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 LINC01565O15544 149 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 SLC26A4O43511 780 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 SRGAP2CP0DJJ0 459 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 PLCG1P19174 1290 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDK9-204ENST00000491521 YWHABP31946 246 aaKnown RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 PBX3P40426 434 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 CAMK1Q14012 370 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 NAALADL2Q58DX5 795 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 CATSPER4Q7RTX7 472 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 FMR1NBQ8N0W7 255 aaPredicted RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 ZNF710Q8N1W2 664 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 COLGALT1Q8NBJ5 622 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 HELQQ8TDG4 1101 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 CASD1Q96PB1 797 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 HSD17B14Q9BPX1 270 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 ELAC1Q9H777 363 aaKnown RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 DDX19AQ9NUU7 478 aaKnown RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 RNF19AQ9NV58 838 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
CDK9-204ENST00000491521 PIN4Q9Y237 131 aaKnown RBP15.11■□□□□ 0.01
CDK9-204ENST00000491521 ARID2Q68CP9 1835 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 A0A087WWV3 80 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 A0A087X0B3 334 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
CDK9-204ENST00000491521 HOXA2O43364 376 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 FGF18O76093 207 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
CDK9-204ENST00000491521 NRIP1P48552 1158 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 DLX2Q07687 328 aaPredicted RBP15.1■□□□□ 0.01
CDK9-204ENST00000491521 EMC2Q15006 297 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 ECM1Q16610 540 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 CLLU1OSQ5K130 101 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 TWF2Q6IBS0 349 aaKnown RBP15.1■□□□□ 0.01
CDK9-204ENST00000491521 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 OTUD6AQ7L8S5 288 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 ENGASEQ8NFI3 743 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 LPPQ93052 612 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 CCDC43Q96MW1 224 aaKnown RBP15.1■□□□□ 0.01
CDK9-204ENST00000491521 CWH43Q9H720 699 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 ZSWIM4Q9H7M6 989 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 USP25Q9UHP3 1055 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 COL4A3BPQ9Y5P4 624 aa15.1■□□□□ 0.01
CDK9-204ENST00000491521 SSBP05455 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDK9-204ENST00000491521 LAG3P18627 525 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 RFC5P40937 340 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 NDUFV1P49821 464 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 CDC42EP1Q00587 391 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 SNW1Q13573 536 aaKnown RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 DHX8Q14562 1220 aaKnown RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 HYIQ5T013 277 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 LRRC55Q6ZSA7 311 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 ZNF410Q86VK4 478 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 C4orf19Q8IY42 314 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 PRPF31Q8WWY3 499 aaKnown RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 PSPC1Q8WXF1 523 aaKnown RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 PPP2R3CQ969Q6 453 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 NACC1Q96RE7 527 aa15.09■□□□□ 0.01
CDK9-204ENST00000491521 INO80BQ9C086 356 aaPredicted RBP15.09■□□□□ 0.01
CDK9-204ENST00000491521 A0A0U1RQF3 1178 aa15.08■□□□□ 0
CDK9-204ENST00000491521 GRXCR2A6NFK2 248 aa15.08■□□□□ 0
CDK9-204ENST00000491521 E9PMD0 336 aa15.08■□□□□ 0
CDK9-204ENST00000491521 PER2O15055 1255 aa15.08■□□□□ 0
CDK9-204ENST00000491521 NCK2O43639 380 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms