RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 UIMC1Q96RL1 719 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 BOCQ9BWV1 1114 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 AMNQ9BXJ7 453 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 KRTAP4-5Q9BYR2 181 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 CELF4Q9BZC1 486 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 MEGF9Q9H1U4 602 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ACSS2Q9NR19 701 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 TOMM22Q9NS69 142 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ZBTB40Q9NUA8 1239 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ING1Q9UK53 422 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 MSRB2Q9Y3D2 182 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 ASB1Q9Y576 335 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 WDR7Q9Y4E6 1490 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PTPRTO14522 1441 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 EIF2AK4Q9P2K8 1649 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 KIF1BO60333 1816 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PLEKHH1Q9ULM0 1364 aa2.49□□□□□ -2.01
SNRNP40-207ENST00000491106 PRDM15P57071 1507 aaPredicted RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 EVC2Q86UK5 1308 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 KIF16BQ96L93 1317 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 ERCC6Q03468 1493 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SCAF11Q99590 1463 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TCRBV16S1A1N1A0A5B0 115 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 UBE2QL1A1L167 161 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 FSD2A1L4K1 749 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC26A4O43511 780 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 GAS7O60861 476 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 NPTXRO95502 500 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 CYP17A1P05093 508 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 C6orf222P0C671 652 aaPredicted RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 JMJD7P0C870 316 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 U2AF1L5P0DN76 240 aaPredicted RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC9A1P19634 815 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MAKP20794 623 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 IGFALSP35858 605 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 RIPK4P57078 832 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 NUCB2P80303 420 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 U2AF1Q01081 240 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 NUCB1Q02818 461 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 RBL2Q08999 1139 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 KLF10Q13118 480 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TUBA3CQ13748 450 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SEC23AQ15436 765 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 CDSNQ15517 529 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 ELAVL1Q15717 326 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TBR1Q16650 682 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 DGKDQ16760 1214 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TUBA3EQ6PEY2 450 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 CRIP3Q6Q6R5 217 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 FAM111BQ6SJ93 734 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 OVCH1Q7RTY7 1134 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 LRP10Q7Z4F1 713 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 FGD2Q7Z6J4 655 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 ADGRE4PQ86SQ3 457 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 RPAP2Q8IXW5 612 aaPredicted RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SYNE4Q8N205 404 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 ANKRD35Q8N283 1001 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MB21D1Q8N884 522 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 OR5M3Q8NGP4 307 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 UBE2Q2Q8WVN8 375 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 ANP32BQ92688 251 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 FERMT2Q96AC1 680 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 DYDC2Q96IM9 177 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 WDR92Q96MX6 357 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 PLEKHF1Q96S99 279 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TCF25Q9BQ70 676 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MENTQ9BUN1 341 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MRPL4Q9BYD3 311 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TRIM8Q9BZR9 551 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MMRN2Q9H8L6 949 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC2A4RGQ9NR83 387 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC52A1Q9NWF4 448 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TERF2IPQ9NYB0 399 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 BTBD7Q9P203 1132 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 C11orf21Q9P2W6 132 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 DNAI1Q9UI46 699 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 USP18Q9UMW8 372 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 TNPO3Q9Y5L0 923 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 PTCH2Q9Y6C5 1203 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 IQGAP3Q86VI3 1631 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 NEURL4Q96JN8 1562 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 MYO5CQ9NQX4 1742 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 SBNO2Q9Y2G9 1366 aa2.48□□□□□ -2.01
SNRNP40-207ENST00000491106 CLASP1Q7Z460 1538 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 WDR33Q9C0J8 1336 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 A2MP01023 1474 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 MAGI2Q86UL8 1455 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 WNT9AO14904 365 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 PLD2O14939 933 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 FYB1O15117 783 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 FAM20BO75063 409 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ASMTLO95671 621 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SLPIP03973 132 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ASLP04424 464 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 C1SP09871 688 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 GNAT2P19087 354 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ACVRL1P37023 503 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SCNN1BP51168 640 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 BCAR1P56945 870 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms