RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 SEC24BO95487 1268 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 GALTP07902 379 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 HOXB8P17481 243 aaPredicted RBP23.36■■□□□ 1.33
SYNE4-205ENST00000490730 SLC11A1P49279 550 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 GUCY1B3Q02153 619 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 AGMOQ6ZNB7 445 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 ZNF280BQ86YH2 543 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 BCL7CQ8WUZ0 217 aaPredicted RBP23.36■■□□□ 1.33
SYNE4-205ENST00000490730 EDAQ92838 391 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 FAM193BQ96PV7 902 aaPredicted RBP23.36■■□□□ 1.33
SYNE4-205ENST00000490730 ZBP1Q9H171 429 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 XPNPEP1Q9NQW7 623 aa23.36■■□□□ 1.33
SYNE4-205ENST00000490730 CARNS1A5YM72 827 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 INO80B-WBP1J3KQ70 363 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 HOXA11P31270 313 aaPredicted RBP23.35■■□□□ 1.33
SYNE4-205ENST00000490730 TFDP1Q14186 410 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 MXD4Q14582 209 aaPredicted RBP23.35■■□□□ 1.33
SYNE4-205ENST00000490730 SAFBQ15424 915 aaKnown RBP eCLIP23.35■■□□□ 1.33
SYNE4-205ENST00000490730 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 UBXN11Q5T124 520 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 DDX53Q86TM3 631 aaKnown RBP23.35■■□□□ 1.33
SYNE4-205ENST00000490730 HSD17B14Q9BPX1 270 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 CDH22Q9UJ99 828 aa23.35■■□□□ 1.33
SYNE4-205ENST00000490730 CNTNAP2Q9UHC6 1331 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 A0A087WWV3 80 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 POTEMA6NI47 508 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 B4GALT3O60512 393 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 POMCP01189 267 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 MCM7P33993 719 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 ST3GAL1Q11201 340 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 CES5AQ6NT32 575 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 MRPL10Q7Z7H8 261 aaKnown RBP23.34■■□□□ 1.33
SYNE4-205ENST00000490730 ASAP3Q8TDY4 903 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 PIGOQ8TEQ8 1089 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 CPB2Q96IY4 423 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 ANKEF1Q9NU02 776 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 MUC6Q6W4X9 2439 aa23.34■■□□□ 1.33
SYNE4-205ENST00000490730 TSPAN1O60635 241 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 DGAT1O75907 488 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 LYPLA2O95372 231 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 SSBP05455 408 aaKnown RBP eCLIP23.33■■□□□ 1.33
SYNE4-205ENST00000490730 CTSAP10619 480 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 ITGA4P13612 1032 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 AFF1P51825 1210 aaKnown RBP23.33■■□□□ 1.33
SYNE4-205ENST00000490730 PTENP60484 403 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 NCBP1Q09161 790 aaKnown RBP23.33■■□□□ 1.33
SYNE4-205ENST00000490730 CCDC83Q8IWF9 413 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 MTMR9Q96QG7 549 aa23.33■■□□□ 1.33
SYNE4-205ENST00000490730 DDHD2O94830 711 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
SYNE4-205ENST00000490730 ZXDAP98168 799 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 CAPSQ13938 189 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 RARS2Q5T160 578 aaKnown RBP23.32■■□□□ 1.32
SYNE4-205ENST00000490730 NOTUMQ6P988 496 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 TRIM67Q6ZTA4 783 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 ZBTB33Q86T24 672 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 CNNM3Q8NE01 707 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 MFSD14AQ96MC6 490 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 APOL6Q9BWW8 343 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 EIF2AQ9BY44 585 aaKnown RBP23.32■■□□□ 1.32
SYNE4-205ENST00000490730 POLR3FQ9H1D9 316 aaPredicted RBP23.32■■□□□ 1.32
SYNE4-205ENST00000490730 TMEM60Q9H2L4 133 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 KANSL3Q9P2N6 904 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 LIMCH1Q9UPQ0 1083 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 IPPQ9Y573 584 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 TECTAO75443 2155 aa23.32■■□□□ 1.32
SYNE4-205ENST00000490730 TMEM221A6NGB7 291 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 M0R296 226 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 USO1O60763 962 aaKnown RBP23.31■■□□□ 1.32
SYNE4-205ENST00000490730 WEE2P0C1S8 567 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 AXLP30530 894 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 RARRES1P49788 294 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 GIT2Q14161 759 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 MAEAQ7L5Y9 396 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 C12orf76Q8N812 135 aaPredicted RBP23.31■■□□□ 1.32
SYNE4-205ENST00000490730 SMG8Q8ND04 991 aaKnown RBP23.31■■□□□ 1.32
SYNE4-205ENST00000490730 C8orf76Q96K31 380 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 VN1R3Q9BXE9 311 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 TRIM6Q9C030 488 aaPredicted RBP23.31■■□□□ 1.32
SYNE4-205ENST00000490730 ADAM7Q9H2U9 754 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 FAN1Q9Y2M0 1017 aa23.31■■□□□ 1.32
SYNE4-205ENST00000490730 SPDYE4A6NLX3 237 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 ALDH2P05091 517 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 EPCAMP16422 314 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 MBTD1Q05BQ5 628 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 ITIH3Q06033 890 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 PCBP1Q15365 356 aaKnown RBP eCLIP23.3■■□□□ 1.32
SYNE4-205ENST00000490730 CCDC51Q96ER9 411 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 UBN1Q9NPG3 1134 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 DZANK1Q9NVP4 752 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 PRG3Q9Y2Y8 225 aaPredicted RBP23.3■■□□□ 1.32
SYNE4-205ENST00000490730 NR2E1Q9Y466 385 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 HES2Q9Y543 173 aa23.3■■□□□ 1.32
SYNE4-205ENST00000490730 GLRA2P23416 452 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 ARL2P36404 184 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 MLH1P40692 756 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 GNL2Q13823 731 aaKnown RBP23.29■■□□□ 1.32
SYNE4-205ENST00000490730 PTPN14Q15678 1187 aa23.29■■□□□ 1.32
SYNE4-205ENST00000490730 PBXIP1Q96AQ6 731 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms