RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ROR1Q01973 937 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ANO4Q32M45 955 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 CIAPIN1Q6FI81 312 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 GRAMD4Q6IC98 578 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 MYLK4Q86YV6 388 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 SAAL1Q96ER3 474 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF18P17022 549 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 PSMC5P62195 406 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 DNAL1Q4LDG9 190 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 RMDN3Q96TC7 470 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 OLA1Q9NTK5 396 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 NRBP1Q9UHY1 535 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 E2F6O75461 281 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 GNA15P30679 374 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 CXCR5P32302 372 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 HSD17B4P51659 736 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 IL1RL1Q01638 556 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 GPR162Q16538 588 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 AASDHQ4L235 1098 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 RCOR2Q8IZ40 523 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF564Q8TBZ8 553 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ADAM21Q9UKJ8 722 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 RPLP2P05387 115 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TERF2Q15554 542 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 SMARCAL1Q9NZC9 954 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 SYNJ2BP-COX16A0A087WUM0 186 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ACSL3O95573 720 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 APOA1P02647 267 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 KCNQ4P56696 695 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ENAHQ8N8S7 591 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 C3orf20Q8ND61 904 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 NAF1Q96HR8 494 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 WDR70Q9NW82 654 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 COX16Q9P0S2 106 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 USP17L5A8MUK1 530 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TRIM28Q13263 835 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 PTK2BQ14289 1009 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TKFCQ3LXA3 575 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TBC1D1Q86TI0 1168 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 TTLL11Q8NHH1 800 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 PBXIP1Q96AQ6 731 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ATP6V1G3Q96LB4 118 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 NLRP4Q96MN2 994 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ZC4H2Q9NQZ6 224 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 INTUQ9ULD6 942 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 E5RI56 91 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF197O14709 1029 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 DYNLT1P63172 113 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ERFEQ4G0M1 354 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 FAM133BQ5BKY9 247 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 SMYD4Q8IYR2 804 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PDS5AQ29RF7 1337 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 TMEM94Q12767 1356 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 C16orf96A6NNT2 1141 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 H0Y626 953 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 P4HA2O15460 535 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 TRIM16O95361 564 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PKP1Q13835 747 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 OR6B3Q8NGW1 331 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 LPAR1Q92633 364 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ULK4Q96C45 1275 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 GAS2O43903 313 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ATL2Q8NHH9 583 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 HSPH1Q92598 858 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 NGRNQ9NPE2 291 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 NEXMIFQ5QGS0 1516 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 MROH7-TTC4A0A0A0MT08 1334 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 LRRIQ3A6PVS8 624 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 AGTP01019 485 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 CATSPER4Q7RTX7 472 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 EPAS1Q99814 870 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PCIF1Q9H4Z3 704 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 RPSAP08865 295 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 HP1BP3Q5SSJ5 553 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 SGSM3Q96HU1 749 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 NUP85Q9BW27 656 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PCDHGB4Q9UN71 923 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 H2AFYO75367 372 aaKnown RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 PEX19P40855 299 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 INPP5AQ14642 412 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 HIF1AQ16665 826 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms