RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C1QTNF3Q9BXJ4 246 aa7.18□□□□□ -1.26
CCDC39-206ENST00000489868 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
CCDC39-206ENST00000489868 PUS7LQ9H0K6 701 aaKnown RBP7.18□□□□□ -1.26
CCDC39-206ENST00000489868 NELFAQ9H3P2 528 aa7.18□□□□□ -1.26
CCDC39-206ENST00000489868 MSL2Q9HCI7 577 aa7.18□□□□□ -1.26
CCDC39-206ENST00000489868 MTSS1O43312 755 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 STC2O76061 302 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 JUNP05412 331 aaKnown RBP7.17□□□□□ -1.26
CCDC39-206ENST00000489868 COMTP21964 271 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 IARSP41252 1262 aaKnown RBP7.17□□□□□ -1.26
CCDC39-206ENST00000489868 KLF1Q13351 362 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-206ENST00000489868 SPIDRQ14159 915 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 PTPROQ16827 1216 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 MUM1Q2TAK8 710 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 KRT40Q6A162 431 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 TAS1R1Q7RTX1 841 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 POLNQ7Z5Q5 900 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 ENKD1Q9H0I2 346 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 SH3BP1Q9Y3L3 701 aa7.17□□□□□ -1.26
CCDC39-206ENST00000489868 ACO1P21399 889 aaKnown RBP7.16□□□□□ -1.26
CCDC39-206ENST00000489868 MTNR1BP49286 362 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 SELENOPP49908 381 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 NRG3P56975 720 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 SPTY2D1Q68D10 685 aaPredicted RBP7.16□□□□□ -1.26
CCDC39-206ENST00000489868 MAMDC4Q6UXC1 1216 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 PALM2Q8IXS6 379 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 RPUSD2Q8IZ73 545 aaKnown RBP7.16□□□□□ -1.26
CCDC39-206ENST00000489868 CMTM4Q8IZR5 234 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 ZNF808Q8N4W9 903 aaPredicted RBP7.16□□□□□ -1.26
CCDC39-206ENST00000489868 LILRA3Q8N6C8 439 aaPredicted RBP7.16□□□□□ -1.26
CCDC39-206ENST00000489868 AUTS2Q8WXX7 1259 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 DEF6Q9H4E7 631 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 NCDNQ9UBB6 729 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 TRHDEQ9UKU6 1024 aa7.16□□□□□ -1.26
CCDC39-206ENST00000489868 LTA4HP09960 611 aaKnown RBP7.15□□□□□ -1.26
CCDC39-206ENST00000489868 OSMP13725 252 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 CTSSP25774 331 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 CASRP41180 1078 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 GLB1L3Q8NCI6 653 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-206ENST00000489868 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-206ENST00000489868 ADOQ96SZ5 270 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 MENTQ9BUN1 341 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 IFT122Q9HBG6 1241 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 TLR9Q9NR96 1032 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 SCOCQ9UIL1 159 aa7.15□□□□□ -1.26
CCDC39-206ENST00000489868 FZD9O00144 591 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 GABRDO14764 452 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 ADRB1P08588 477 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 CANXP27824 592 aaKnown RBP7.14□□□□□ -1.27
CCDC39-206ENST00000489868 ADRM1Q16186 407 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 ABCB5Q2M3G0 1257 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 FAM214AQ32MH5 1076 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 SYDE2Q5VT97 1194 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 FAM111BQ6SJ93 734 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 MTMR8Q96EF0 704 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 TCF25Q9BQ70 676 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 DMRT3Q9NQL9 472 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 RCAN3Q9UKA8 241 aa7.14□□□□□ -1.27
CCDC39-206ENST00000489868 WASHC2AQ641Q2 1341 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 WASHC2CQ9Y4E1 1318 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 PRAMEF4O60810 478 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 MT-CO1P00395 513 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 ITKQ08881 620 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 D2HGDHQ8N465 521 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 SNX33Q8WV41 574 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 EDAQ92838 391 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 TCAF1Q9Y4C2 921 aa7.13□□□□□ -1.27
CCDC39-206ENST00000489868 TRIM75PA6NK02 468 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 WNT10BO00744 389 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA12O60330 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 MEF2AQ02078 507 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PPP3CAQ08209 521 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 SPDYAQ5MJ70 313 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 BTNL9Q6UXG8 535 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 C1orf162Q8NEQ5 155 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-206ENST00000489868 ZNF512Q96ME7 567 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-206ENST00000489868 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-206ENST00000489868 TSC22D4Q9Y3Q8 395 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA9Q9Y5G4 932 aaKnown RBP7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA8Q9Y5G5 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA6Q9Y5G7 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA3Q9Y5H0 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 PCDHGA2Q9Y5H1 932 aa7.12□□□□□ -1.27
CCDC39-206ENST00000489868 MUSKO15146 869 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 PLSCR1O15162 318 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 ADCY6O43306 1168 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 MTHFD2P13995 350 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 AGXTP21549 392 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 NPEPPSP55786 919 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 C19orf54Q5BKX5 351 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 Q6ZVL8 140 aa7.11□□□□□ -1.27
CCDC39-206ENST00000489868 ELOA2Q8IYF1 753 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-206ENST00000489868 ZCRB1Q8TBF4 217 aaKnown RBP7.11□□□□□ -1.27
CCDC39-206ENST00000489868 RIN2Q8WYP3 895 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms