RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 RNF43Q68DV7 783 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 GRASPQ7Z6J2 395 aaPredicted RBP16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 PDZD3Q86UT5 571 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 ZNF687Q8N1G0 1237 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 ZSWIM5Q9P217 1185 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 AKT3Q9Y243 479 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 FAN1Q9Y2M0 1017 aa16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 MTCL1Q9Y4B5 1905 aaKnown RBP16.62■□□□□ 0.25
SDHAF3-204ENST00000489852 ZNF213O14771 459 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 TGM5O43548 720 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 CYTH3O43739 400 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 ATG7O95352 703 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 FGFR4P22455 802 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 FAM160B1Q5W0V3 765 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 TAS1R1Q7RTX1 841 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 FAM227BQ96M60 508 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 LMAN1LQ9HAT1 526 aa16.61■□□□□ 0.25
SDHAF3-204ENST00000489852 DOCK6Q96HP0 2047 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 CYSRT1A8MQ03 144 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 MAN2B1O00754 1011 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 OFD1O75665 1012 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 C1RP00736 705 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 MS4A1P11836 297 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 GLUD2P49448 558 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 CLCN3P51790 818 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 NTHL1P78549 312 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 C19orf48Q6RUI8 117 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 ZNF668Q96K58 619 aaPredicted RBP16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 NFASCO94856 1347 aa16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 HELZ2Q9BYK8 2649 aaKnown RBP16.6■□□□□ 0.25
SDHAF3-204ENST00000489852 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 MEIS3P2A8K0S8 358 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 NRP1O14786 923 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 ZMYND10O75800 440 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 DDHD2O94830 711 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 SKIP12755 728 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 PDXDC2PQ6P474 469 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 ZNF589Q86UQ0 364 aaPredicted RBP16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 ZNF710Q8N1W2 664 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 URGCPQ8TCY9 931 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 LOXL4Q96JB6 756 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 SCLT1Q96NL6 688 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 FAM193BQ96PV7 902 aaPredicted RBP16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 TMEM175Q9BSA9 504 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 CHST12Q9NRB3 414 aa16.59■□□□□ 0.25
SDHAF3-204ENST00000489852 SH3PXD2AQ5TCZ1 1133 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 ITFG1Q8TB96 612 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 TRAIPQ9BWF2 469 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 ZNF302Q9NR11 478 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 GPSM3Q9Y4H4 160 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 LAMA1P25391 3075 aa16.58■□□□□ 0.24
SDHAF3-204ENST00000489852 EPN2O95208 641 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 TMOD1P28289 359 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 DSG1Q02413 1049 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 GRM4Q14833 912 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 EFCAB12Q6NXP0 572 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 LILRA6Q6PI73 481 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 ABHD15Q6UXT9 468 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 GLYCTKQ8IVS8 523 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 CCDC60Q8IWA6 550 aaPredicted RBP16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 ADAM32Q8TC27 787 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 DNASE1L2Q92874 299 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 SMOC1Q9H4F8 434 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 NEUROG3Q9Y4Z2 214 aa16.57■□□□□ 0.24
SDHAF3-204ENST00000489852 BPTFQ12830 3046 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 MAGEB2O15479 319 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 ECI2O75521 394 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 CSDE1O75534 798 aaKnown RBP16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 ATP4AP20648 1035 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 GPC3P51654 580 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 PLA2G2CQ5R387 149 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 FAM3CQ92520 227 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 BBC3Q96PG8 261 aaPredicted RBP16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 PLA2G2FQ9BZM2 168 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 MARCH5Q9NX47 278 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 PRG3Q9Y2Y8 225 aaPredicted RBP16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
SDHAF3-204ENST00000489852 SDK1Q7Z5N4 2213 aa16.55■□□□□ 0.24
SDHAF3-204ENST00000489852 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
SDHAF3-204ENST00000489852 K7ESF4 209 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms