RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 TELO2Q9Y4R8 837 aa11.34□□□□□ -0.59
AC055748.1-201ENST00000489836 STK36Q9NRP7 1315 aa11.34□□□□□ -0.59
AC055748.1-201ENST00000489836 CDKL5O76039 1030 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 PCSK2P16519 638 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 NPR3P17342 541 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 CIITAP33076 1130 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 EPHB4P54760 987 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 MTMR1Q13613 665 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 LRIT3Q3SXY7 679 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 GTF3C6Q969F1 213 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 NOC4LQ9BVI4 516 aaKnown RBP11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 NFASCO94856 1347 aa11.33□□□□□ -0.6
AC055748.1-201ENST00000489836 IGLV3-22A0A075B6J6 115 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 GSTTP1A0A1W2PQM5 241 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 FAM86B1E9PN63 330 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 SORBS3O60504 671 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 LGALS2P05162 132 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 FAM86B2P0C5J1 330 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 ARP10275 920 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 HOXC8P31273 242 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 NLRP5P59047 1200 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 NRG1Q02297 640 aaPredicted RBP11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 GALNT17Q6IS24 598 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 ALKBH2Q6NS38 261 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 XKR5Q6UX68 686 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 CEP120Q8N960 986 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 PPP1R13LQ8WUF5 828 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 HIPK3Q9H422 1215 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 GTF2IRD1Q9UHL9 959 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 UMODL1Q5DID0 1318 aa11.32□□□□□ -0.6
AC055748.1-201ENST00000489836 RANBP2P49792 3224 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 H3BRB1 525 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 FZD6O60353 706 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 FAM13AO94988 1023 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 ZNF286BP0CG31 522 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 CYP2C9P11712 490 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 CDC25BP30305 580 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 CYP2C18P33260 490 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 FPGSQ05932 587 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 RBL2Q08999 1139 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 ITGB3BPQ13352 177 aaPredicted RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 SHHQ15465 462 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 C16orf59Q7L2K0 433 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 BLIDQ8IZY5 108 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 TTC16Q8NEE8 873 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 SEPT1Q8WYJ6 367 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 VWCEQ96DN2 955 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
AC055748.1-201ENST00000489836 DLL1O00548 723 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 DHX15O43143 795 aaKnown RBP11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 CES1P23141 567 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 SERPINB4P48594 390 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 USP11P51784 963 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 ADAM17P78536 824 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 PTGISQ16647 500 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 LENG9Q96B70 501 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 PCYT2Q99447 389 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
AC055748.1-201ENST00000489836 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 CYP3A7-CYP3A51PA0A087WV96 503 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 IGKV6D-21A0A0A0MT36 114 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 LINC01387J3KSC0 135 aa11.29□□□□□ -0.6
AC055748.1-201ENST00000489836 DTNBO60941 627 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms