RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CST5P28325 142 aaPredicted RBP23.67■■□□□ 1.38
SMC4-221ENST00000489573 ADSSP30520 456 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 GRK4P32298 578 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 PTENP60484 403 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 POU5F1BQ06416 359 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 NFKBIZQ9BYH8 718 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 PTCH2Q9Y6C5 1203 aa23.67■■□□□ 1.38
SMC4-221ENST00000489573 GARTP22102 1010 aa23.66■■□□□ 1.38
SMC4-221ENST00000489573 PHKA2P46019 1235 aa23.66■■□□□ 1.38
SMC4-221ENST00000489573 TBX2Q13207 712 aaPredicted RBP23.66■■□□□ 1.38
SMC4-221ENST00000489573 KLHDC9Q8NEP7 349 aa23.66■■□□□ 1.38
SMC4-221ENST00000489573 BORCS6Q96GS4 357 aa23.66■■□□□ 1.38
SMC4-221ENST00000489573 C17orf102A2RUQ5 167 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 ADAM17P78536 824 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 MAPK6Q16659 721 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 CXCL17Q6UXB2 119 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 KIAA0319LQ8IZA0 1049 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 C7orf31Q8N865 590 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 CCDC150Q8NCX0 1101 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 PPP1R13LQ8WUF5 828 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 POMGNT1Q8WZA1 660 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 ZNF668Q96K58 619 aaPredicted RBP23.65■■□□□ 1.38
SMC4-221ENST00000489573 ERGIC2Q96RQ1 377 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 WBP1LQ9NX94 342 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.65■■□□□ 1.383e-11■■■□□ 18.8
SMC4-221ENST00000489573 MAPK13O15264 365 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 MSCO60682 206 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 VTNP04004 478 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 PRKCBP05771 671 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 HOXC8P31273 242 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 DCAF17Q5H9S7 520 aaPredicted RBP23.65■■□□□ 1.38
SMC4-221ENST00000489573 IFNLR1Q8IU57 520 aaPredicted RBP23.65■■□□□ 1.38
SMC4-221ENST00000489573 TARS2Q9BW92 718 aaKnown RBP23.65■■□□□ 1.38
SMC4-221ENST00000489573 MRPL4Q9BYD3 311 aaKnown RBP23.65■■□□□ 1.38
SMC4-221ENST00000489573 HDAC6Q9UBN7 1215 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 STYXL1Q9Y6J8 313 aa23.65■■□□□ 1.38
SMC4-221ENST00000489573 EVPLQ92817 2033 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 SMIM35A0A1B0GVV1 85 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 EDN1P05305 212 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 GNAT1P11488 350 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 CYP2C9P11712 490 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 TRIM14Q14142 442 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 HIC1Q14526 733 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 SYCP1Q15431 976 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 SLFN12LQ6IEE8 588 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 ZPBP2Q6X784 338 aa23.64■■□□□ 1.37
SMC4-221ENST00000489573 PCSK9Q8NBP7 692 aaKnown RBP23.64■■□□□ 1.37
SMC4-221ENST00000489573 HMX1Q9NP08 348 aaPredicted RBP23.64■■□□□ 1.37
SMC4-221ENST00000489573 KAT6AQ92794 2004 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 INO80B-WBP1J3KQ70 363 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 KIAA0391O15091 583 aaKnown RBP23.63■■□□□ 1.37
SMC4-221ENST00000489573 AFPP02771 609 aaKnown RBP23.63■■□□□ 1.37
SMC4-221ENST00000489573 KRT13P13646 458 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 GPC3P51654 580 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 MBTD1Q05BQ5 628 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 KCNH2Q12809 1159 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 TCERG1LQ5VWI1 586 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 CCSAPQ6IQ19 270 aaPredicted RBP23.63■■□□□ 1.37
SMC4-221ENST00000489573 ZNF410Q86VK4 478 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 PPFIBP1Q86W92 1011 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 SLC35C1Q96A29 364 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 SAAL1Q96ER3 474 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 INO80BQ9C086 356 aaPredicted RBP23.63■■□□□ 1.37
SMC4-221ENST00000489573 FAM49AQ9H0Q0 323 aaPredicted RBP23.63■■□□□ 1.37
SMC4-221ENST00000489573 FZD8Q9H461 694 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 IFT122Q9HBG6 1241 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 USP20Q9Y2K6 914 aa23.63■■□□□ 1.37
SMC4-221ENST00000489573 A0A087WZ62 844 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 MYCNP04198 464 aaPredicted RBP23.62■■□□□ 1.37
SMC4-221ENST00000489573 ASGR1P07306 291 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.37
SMC4-221ENST00000489573 ARID5BQ14865 1188 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 KCNA10Q16322 511 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 INTS8Q75QN2 995 aaKnown RBP23.62■■□□□ 1.37
SMC4-221ENST00000489573 RNF180Q86T96 592 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 RDH13Q8NBN7 331 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 ZSWIM2Q8NEG5 633 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 NLRP7Q8WX94 980 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 FBXL18Q96ME1 805 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 SCLT1Q96NL6 688 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 PPP1R16BQ96T49 567 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 FDXACB1Q9BRP7 624 aaPredicted RBP23.62■■□□□ 1.37
SMC4-221ENST00000489573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.62■■□□□ 1.37
SMC4-221ENST00000489573 SCN10AQ9Y5Y9 1956 aa23.62■■□□□ 1.37
SMC4-221ENST00000489573 GOLGA8IPA6NC78 632 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 GOLGA8JA6NMD2 632 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 ACKR2O00590 384 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 TPM1P09493 284 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 CDC42EP1Q00587 391 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 BFSP1Q12934 665 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 SNRNP35Q16560 246 aaKnown RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 NBPF20Q3BBV1 942 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 LRRC8AQ8IWT6 810 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 GPD1LQ8N335 351 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 CACTINQ8WUQ7 758 aaKnown RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 PCMTD1Q96MG8 357 aaPredicted RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 ZNF830Q96NB3 372 aaPredicted RBP23.61■■□□□ 1.37
SMC4-221ENST00000489573 KCNF1Q9H3M0 494 aa23.61■■□□□ 1.37
SMC4-221ENST00000489573 PRMT7Q9NVM4 692 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms