RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
SFXN3-207ENST00000489434 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 SFXN1Q9H9B4 322 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 DPP7Q9UHL4 492 aa13.34□□□□□ -0.27
SFXN3-207ENST00000489434 M0R2N6 131 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 ASAP2O43150 1006 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
SFXN3-207ENST00000489434 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.28
SFXN3-207ENST00000489434 KLRC2P26717 231 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 SLC11A1P49279 550 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 STK3Q13188 491 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
SFXN3-207ENST00000489434 PTPN14Q15678 1187 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 CCDC149Q6ZUS6 474 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 TMEM175Q9BSA9 504 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 TM6SF1Q9BZW5 370 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 UBN1Q9NPG3 1134 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
SFXN3-207ENST00000489434 FAM86C1Q9NVL1 165 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
SFXN3-207ENST00000489434 MEIS3P2A8K0S8 358 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 EML1O00423 815 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 TBX3O15119 743 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 SLC37A4O43826 429 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 NR1I2O75469 434 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 ERLIN2O94905 339 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
SFXN3-207ENST00000489434 URODP06132 367 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 ASGR2P07307 311 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 NPEPPSP55786 919 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 LAMTOR4Q0VGL1 99 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 PCBP1Q15365 356 aaKnown RBP eCLIP13.32□□□□□ -0.28
SFXN3-207ENST00000489434 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
SFXN3-207ENST00000489434 PPP4R3AQ6IN85 833 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 MRPL10Q7Z7H8 261 aaKnown RBP13.32□□□□□ -0.28
SFXN3-207ENST00000489434 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 TMEM143Q96AN5 459 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 DHX33Q9H6R0 707 aaKnown RBP13.32□□□□□ -0.28
SFXN3-207ENST00000489434 KCNMB3Q9NPA1 279 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
SFXN3-207ENST00000489434 H0Y858 1186 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 CCNT1O60563 726 aaKnown RBP13.31□□□□□ -0.28
SFXN3-207ENST00000489434 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
SFXN3-207ENST00000489434 ADH1AP07327 375 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
SFXN3-207ENST00000489434 CLCN5P51795 746 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
SFXN3-207ENST00000489434 EMC2Q15006 297 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 EPHA7Q15375 998 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 NPY5RQ15761 445 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 AGMOQ6ZNB7 445 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 C4orf19Q8IY42 314 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 HACE1Q8IYU2 909 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
SFXN3-207ENST00000489434 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 LXNQ9BS40 222 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 ZSWIM4Q9H7M6 989 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 KCNJ14Q9UNX9 436 aa13.31□□□□□ -0.28
SFXN3-207ENST00000489434 POMCP01189 267 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 CNPP09543 421 aaKnown RBP13.3□□□□□ -0.28
SFXN3-207ENST00000489434 ITGA4P13612 1032 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
SFXN3-207ENST00000489434 AXLP30530 894 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
SFXN3-207ENST00000489434 CLCN4P51793 760 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 AK2P54819 239 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 TDGQ13569 410 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 TFDP1Q14186 410 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 FERMT3Q86UX7 667 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 WASF1Q92558 559 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
SFXN3-207ENST00000489434 KLHL5Q96PQ7 755 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
SFXN3-207ENST00000489434 PHF20Q9BVI0 1012 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 VN1R3Q9BXE9 311 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 FBXL21Q9UKT6 434 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
SFXN3-207ENST00000489434 C2CD2LO14523 706 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 NRP1O14786 923 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 DDHD2O94830 711 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 SOD2P04179 222 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 CYP26C1Q6V0L0 522 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms