RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 COL4A3BPQ9Y5P4 624 aa10.48□□□□□ -0.73
SNX17-207ENST00000489402 DENND4AQ7Z401 1863 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 M0R2N6 131 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 EML1O00423 815 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 SLC37A4O43826 429 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 MARCH6O60337 910 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 BRD1O95696 1058 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 P4HBP07237 508 aaKnown RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 RFC5P40937 340 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 SLC11A1P49279 550 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 AFF1P51825 1210 aaKnown RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 STK3Q13188 491 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 OTUD6AQ7L8S5 288 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 NEK8Q86SG6 692 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 ZDHHC14Q8IZN3 488 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 ACSF2Q96CM8 615 aaPredicted RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 NAP1L4Q99733 375 aaKnown RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 VN1R3Q9BXE9 311 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 IFT122Q9HBG6 1241 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 FAM86C1Q9NVL1 165 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 KANSL3Q9P2N6 904 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 WRAP73Q9P2S5 460 aaPredicted RBP10.47□□□□□ -0.73
SNX17-207ENST00000489402 DNAJB4Q9UDY4 337 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 ARID2Q68CP9 1835 aa10.47□□□□□ -0.73
SNX17-207ENST00000489402 H0Y858 1186 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 ZBTB39O15060 712 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 GALR2O43603 387 aaPredicted RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 CCNT1O60563 726 aaKnown RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 GFRA3O60609 400 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 ERLIN2O94905 339 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 ALDH2P05091 517 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNX17-207ENST00000489402 ASGR2P07307 311 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 SRGAP2CP0DJJ0 459 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 KLRC2P26717 231 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 NPEPPSP55786 919 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 PPP4R3AQ6IN85 833 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 ELMSAN1Q6PJG2 1045 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 TMC5Q6UXY8 1006 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 CCDC149Q6ZUS6 474 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 CNNM3Q8NE01 707 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 PRPF31Q8WWY3 499 aaKnown RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 TMEM143Q96AN5 459 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 LXNQ9BS40 222 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 TM6SF1Q9BZW5 370 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 DHX33Q9H6R0 707 aaKnown RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 KCNMB3Q9NPA1 279 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 UBN1Q9NPG3 1134 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.73
SNX17-207ENST00000489402 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 FAN1Q9Y2M0 1017 aa10.46□□□□□ -0.73
SNX17-207ENST00000489402 MYO10Q9HD67 2058 aa10.46□□□□□ -0.74
SNX17-207ENST00000489402 CACNA1AO00555 2505 aa10.46□□□□□ -0.74
SNX17-207ENST00000489402 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 TBX3O15119 743 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 ASAP2O43150 1006 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 DDHD2O94830 711 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 BAG4O95429 457 aaKnown RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 URODP06132 367 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 YWHABP31946 246 aaKnown RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 NCBP1Q09161 790 aaKnown RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 LAMTOR4Q0VGL1 99 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 EMC2Q15006 297 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 PCBP1Q15365 356 aaKnown RBP eCLIP10.45□□□□□ -0.74
SNX17-207ENST00000489402 EPHA7Q15375 998 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 XKR9Q5GH70 373 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 ASTLQ6HA08 431 aaPredicted RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 AGMOQ6ZNB7 445 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 OTOP3Q7RTS5 596 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 MRPL10Q7Z7H8 261 aaKnown RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 GPR149Q86SP6 731 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 ZNF280BQ86YH2 543 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 C4orf19Q8IY42 314 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 RNF149Q8NC42 400 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 KLHL5Q96PQ7 755 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 PHF20Q9BVI0 1012 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 MINDY3Q9H8M7 445 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
SNX17-207ENST00000489402 SSX2IPQ9Y2D8 614 aa10.45□□□□□ -0.74
SNX17-207ENST00000489402 FRYLO94915 3013 aa10.44□□□□□ -0.74
SNX17-207ENST00000489402 ZDBF2Q9HCK1 2354 aa10.44□□□□□ -0.74
SNX17-207ENST00000489402 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
SNX17-207ENST00000489402 A0A087WWV3 80 aa10.44□□□□□ -0.74
SNX17-207ENST00000489402 C2CD2LO14523 706 aa10.44□□□□□ -0.74
SNX17-207ENST00000489402 NRP1O14786 923 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms