RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 IFT122Q9HBG6 1241 aa12.57□□□□□ -0.4
C9orf3-220ENST00000489318 SETD4Q9NVD3 440 aa12.57□□□□□ -0.4
C9orf3-220ENST00000489318 HSPBP1Q9NZL4 362 aa12.57□□□□□ -0.4
C9orf3-220ENST00000489318 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-220ENST00000489318 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
C9orf3-220ENST00000489318 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
C9orf3-220ENST00000489318 K7ERI5 159 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 ABLIM1O14639 778 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 PHKA2P46019 1235 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 GPC3P51654 580 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 GSDMDP57764 484 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 CDC42EP1Q00587 391 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 UBXN1Q04323 297 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 HIC1Q14526 733 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 KIAA0319LQ8IZA0 1049 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
C9orf3-220ENST00000489318 PRIMPOLQ96LW4 560 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 GTF2IRD1Q9UHL9 959 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 TRIM17Q9Y577 477 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 ANK1P16157 1881 aa12.56□□□□□ -0.4
C9orf3-220ENST00000489318 C17orf102A2RUQ5 167 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 ACKR2O00590 384 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 EXOC3O60645 756 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 PRKCBP05771 671 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 GJB1P08034 283 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 GNAT1P11488 350 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 PROZP22891 400 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 LIG4P49917 911 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 CYP2J2P51589 502 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 BFSP1Q12934 665 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 TRIM14Q14142 442 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 MAPK6Q16659 721 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 FIGNQ5HY92 759 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 FKBP15Q5T1M5 1219 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 LHX8Q68G74 356 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 CCDC150Q8NCX0 1101 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 IQCDQ96DY2 449 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 TTYH3Q9C0H2 523 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 HDAC6Q9UBN7 1215 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf3-220ENST00000489318 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
C9orf3-220ENST00000489318 A0A0B4J269 797 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 MOXD2PA6NHM9 499 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 FAM189A1O60320 539 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 TOM1L1O75674 476 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 CABYRO75952 493 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 GYPCP04921 128 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 RPLP2P05387 115 aaKnown RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 ASGR1P07306 291 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 ADRB2P07550 413 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 CYP2C9P11712 490 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 PCBP1Q15365 356 aaKnown RBP eCLIP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 AMHR2Q16671 573 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 TAF2Q6P1X5 1199 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 CXCL17Q6UXB2 119 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 TSHZ1Q6ZSZ6 1077 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 SRGAP1Q7Z6B7 1085 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 RNF180Q86T96 592 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 GPD1LQ8N335 351 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 TRIM44Q96DX7 344 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 BICD1Q96G01 975 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 ACO2Q99798 780 aaKnown RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 TSEN34Q9BSV6 310 aaKnown RBP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 MINDY3Q9H8M7 445 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 PTPRHQ9HD43 1115 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 AKT3Q9Y243 479 aa12.54□□□□□ -0.4
C9orf3-220ENST00000489318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
C9orf3-220ENST00000489318 HTTP42858 3142 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 A0A087WZ62 844 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 PMM2O15305 246 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 TREHO43280 583 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 EXTL3O43909 919 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 GPR32O75388 356 aa12.53□□□□□ -0.4
C9orf3-220ENST00000489318 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
C9orf3-220ENST00000489318 VTNP04004 478 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms