RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 ME3Q16798 604 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 TMEM87AQ8NBN3 555 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 RNF149Q8NC42 400 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 GTF3C6Q969F1 213 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 DZANK1Q9NVP4 752 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 KANSL3Q9P2N6 904 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 DNAJB4Q9UDY4 337 aa28.99■■■□□ 2.23
RNF220-216ENST00000488865 ZBTB39O15060 712 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 SLC11A1P49279 550 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 NHLH1Q02575 133 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 CYP4A11Q02928 519 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 PTPN21Q16825 1174 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 UBXN11Q5T124 520 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 TPH2Q8IWU9 490 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 NECAB1Q8N987 351 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 BCL7CQ8WUZ0 217 aaPredicted RBP28.98■■■□□ 2.23
RNF220-216ENST00000488865 MTRQ99707 1265 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 GBP3Q9H0R5 595 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 RSAD1Q9HA92 442 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 BMP2KQ9NSY1 1161 aaPredicted RBP28.98■■■□□ 2.23
RNF220-216ENST00000488865 PCDHA12Q9UN75 941 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 ARID2Q68CP9 1835 aa28.98■■■□□ 2.23
RNF220-216ENST00000488865 LYPLA2O95372 231 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 MTHFRP42898 656 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 MXD4Q14582 209 aaPredicted RBP28.97■■■□□ 2.23
RNF220-216ENST00000488865 ZNF280BQ86YH2 543 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 CNNM3Q8NE01 707 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 AUTS2Q8WXX7 1259 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 HSD17B14Q9BPX1 270 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 EIF2AK1Q9BQI3 630 aaKnown RBP28.97■■■□□ 2.23
RNF220-216ENST00000488865 TMEM175Q9BSA9 504 aa28.97■■■□□ 2.23
RNF220-216ENST00000488865 NCLP19338 710 aaKnown RBP28.96■■■□□ 2.23
RNF220-216ENST00000488865 CALCRLQ16602 461 aa28.96■■■□□ 2.23
RNF220-216ENST00000488865 RIPOR3Q96MK2 946 aa28.96■■■□□ 2.23
RNF220-216ENST00000488865 POMKQ9H5K3 350 aa28.96■■■□□ 2.23
RNF220-216ENST00000488865 UBN1Q9NPG3 1134 aa28.96■■■□□ 2.23
RNF220-216ENST00000488865 XPNPEP1Q9NQW7 623 aa28.96■■■□□ 2.23
RNF220-216ENST00000488865 B4GALT3O60512 393 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 DDHD2O94830 711 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 ERLIN2O94905 339 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 ALDH2P05091 517 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 AXLP30530 894 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 PTENP60484 403 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 POU5F1BQ06416 359 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 PPFIBP1Q86W92 1011 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 SUGP1Q8IWZ8 645 aaKnown RBP28.95■■■□□ 2.22
RNF220-216ENST00000488865 NSUN7Q8NE18 718 aaKnown RBP28.95■■■□□ 2.22
RNF220-216ENST00000488865 SLC22A17Q8WUG5 538 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 FAM193BQ96PV7 902 aaPredicted RBP28.95■■■□□ 2.22
RNF220-216ENST00000488865 VN1R3Q9BXE9 311 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 ANKEF1Q9NU02 776 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 CDH22Q9UJ99 828 aa28.95■■■□□ 2.22
RNF220-216ENST00000488865 LARGE1O95461 756 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 TFDP1Q14186 410 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 ALYREFQ86V81 257 aaKnown RBP28.94■■■□□ 2.22
RNF220-216ENST00000488865 IFNLR1Q8IU57 520 aaPredicted RBP28.94■■■□□ 2.22
RNF220-216ENST00000488865 FBXL6Q8N531 539 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 CCDC51Q96ER9 411 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 ASIC4Q96FT7 647 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 TTC12Q9H892 705 aaPredicted RBP28.94■■■□□ 2.22
RNF220-216ENST00000488865 PPP4R2Q9NY27 417 aa28.94■■■□□ 2.22
RNF220-216ENST00000488865 BTBD18B2RXH4 712 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 EIF5BO60841 1220 aaKnown RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 DGAT1O75907 488 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 EPCAMP16422 314 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 SP100P23497 879 aaPredicted RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 AFF1P51825 1210 aaKnown RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 NCBP1Q09161 790 aaKnown RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 PTPN14Q15678 1187 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 RARS2Q5T160 578 aaKnown RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 SMG8Q8ND04 991 aaKnown RBP28.93■■■□□ 2.22
RNF220-216ENST00000488865 PRRX2Q99811 253 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 TSHZ2Q9NRE2 1034 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 FAN1Q9Y2M0 1017 aa28.93■■■□□ 2.22
RNF220-216ENST00000488865 NEMFO60524 1076 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 TSPAN1O60635 241 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 ITGA4P13612 1032 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 TRIM29Q14134 588 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 ATAT1Q5SQI0 421 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 KIAA1841Q6NSI8 718 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 NOTUMQ6P988 496 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 ZBTB33Q86T24 672 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 DIS3L2Q8IYB7 885 aaKnown RBP28.92■■■□□ 2.22
RNF220-216ENST00000488865 IPPQ9Y573 584 aa28.92■■■□□ 2.22
RNF220-216ENST00000488865 INPPL1O15357 1258 aa28.91■■■□□ 2.22
RNF220-216ENST00000488865 POMCP01189 267 aa28.91■■■□□ 2.22
RNF220-216ENST00000488865 C12orf76Q8N812 135 aaPredicted RBP28.91■■■□□ 2.22
RNF220-216ENST00000488865 MTMR9Q96QG7 549 aa28.91■■■□□ 2.22
RNF220-216ENST00000488865 EMILIN2Q9BXX0 1053 aa28.91■■■□□ 2.22
RNF220-216ENST00000488865 C2CD4DB7Z1M9 353 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 INO80B-WBP1J3KQ70 363 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 NRP1O14786 923 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 ARL2P36404 184 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 TXKP42681 527 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 NEK4P51957 841 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 CABP7Q86V35 215 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 CCDC43Q96MW1 224 aaKnown RBP28.9■■■□□ 2.22
RNF220-216ENST00000488865 EIF2AQ9BY44 585 aaKnown RBP28.9■■■□□ 2.22
RNF220-216ENST00000488865 NFKBIZQ9BYH8 718 aa28.9■■■□□ 2.22
RNF220-216ENST00000488865 CSRNP2Q9H175 543 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms