RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PLXNA4Q9HCM2 1894 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MINDY4BA8MYZ0 360 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM189-UBE2V1I3L0A0 370 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ENPP3O14638 875 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 USP17L7P0C7H9 530 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 LIFRP42702 1097 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PTGIRP43119 386 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PFKPQ01813 784 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CNTN2Q02246 1040 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MBTPS1Q14703 1052 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 PPP2R5DQ14738 602 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SEC23AQ15436 765 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TEAD4Q15561 434 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CDC37Q16543 378 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF618Q5T7W0 954 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ARHGEF16Q5VV41 709 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC30A10Q6XR72 485 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC24A5Q71RS6 500 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF438Q7Z4V0 828 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 ITPRIPQ8IWB1 547 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SIRT2Q8IXJ6 389 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SYNPOQ8N3V7 929 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 C1orf127Q8N9H9 656 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TDRD5Q8NAT2 981 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TTC16Q8NEE8 873 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 RUFY2Q8WXA3 655 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 EXOC4Q96A65 974 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC74AQ96AQ1 378 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CRELD1Q96HD1 420 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SUSD3Q96L08 255 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CRBNQ96SW2 442 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 YME1L1Q96TA2 773 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 SH3GLB2Q9NR46 395 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TLR9Q9NR96 1032 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 TRMT13Q9NUP7 481 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 FAM13BQ9NYF5 915 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CLEC1BQ9P126 229 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CNTN3Q9P232 1028 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 HDAC6Q9UBN7 1215 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 WDR81Q562E7 1941 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CEP350Q5VT06 3117 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 CLUHO75153 1309 aa3.11□□□□□ -1.91
DEPDC1-203ENST00000488146 MYH7BA7E2Y1 1941 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 C9IYK1 514 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 M0R2C6 588 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 FOXP2O15409 715 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ASAP2O43150 1006 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ACRP10323 421 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SCG2P13521 617 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ATP4AP20648 1035 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 UBA1P22314 1058 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SFNP31947 248 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ABCD1P33897 745 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CTNNB1P35222 781 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 TBC1D8BQ0IIM8 1120 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 NFX1Q12986 1120 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 LPIN1Q14693 890 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SART3Q15020 963 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 MFSD6Q6ZSS7 791 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 GPR149Q86SP6 731 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC39A11Q8N1S5 342 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 DTWD2Q8NBA8 298 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC26Q8TAB7 109 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SPATA18Q8TC71 538 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 NETO1Q8TDF5 533 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ARNTL2Q8WYA1 636 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CHMP4CQ96CF2 233 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 PGBD4Q96DM1 585 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 RMDN3Q96TC7 470 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ZCCHC2Q9C0B9 1178 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 PLEKHA4Q9H4M7 779 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ZSWIM4Q9H7M6 989 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KAT14Q9H8E8 782 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 TRPV4Q9HBA0 871 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SENP2Q9HC62 589 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 RXFP3Q9NSD7 469 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 TBC1D22BQ9NU19 505 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 DACT1Q9NYF0 836 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 UMODL1Q5DID0 1318 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 MYH6P13533 1939 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SMCHD1A6NHR9 2005 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 FAM221BA6H8Z2 402 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CAPN8A6NHC0 703 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 METTL12A8MUP2 240 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 BCAR3O75815 825 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 CTSAP10619 480 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNA2P16389 499 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ATP2B1P20020 1258 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 MX1P20591 662 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNQ1P51787 676 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 DEFB103AP81534 67 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 BEX3Q00994 111 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KRT76Q01546 638 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KRT17Q04695 432 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 FAM160A1Q05DH4 1040 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 SPIRE1Q08AE8 756 aa3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 ZYXQ15942 572 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-203ENST00000488146 KIAA0753Q2KHM9 967 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms