RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PIK3C3Q8NEB9 887 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 JDP2Q8WYK2 163 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 HOOK2Q96ED9 719 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 NEIL1Q96FI4 390 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 RPL10LQ96L21 214 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 TEKT5Q96M29 485 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 ADI1Q9BV57 179 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC6A15Q9H2J7 730 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 NCDNQ9UBB6 729 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 G3BP2Q9UN86 482 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA9Q9Y5G4 932 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA8Q9Y5G5 932 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA7Q9Y5G6 932 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA6Q9Y5G7 932 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA3Q9Y5H0 932 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 CDC14BO60729 498 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 NDUFS2O75306 463 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 LTA4HP09960 611 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 CT47B1P0C2W7 299 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 KIR2DL3P43628 341 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 RECQLP46063 649 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 EPHB1P54762 984 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 KRT85P78386 507 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 MEF2AQ02078 507 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 MCL1Q07820 350 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 MALLQ13021 153 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 NFYCQ13952 458 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 DPYSL5Q9BPU6 564 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 GREM2Q9H772 168 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 ZNF277Q9NRM2 450 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 ING3Q9NXR8 418 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 IP6K2Q9UHH9 426 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 RCAN3Q9UKA8 241 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 DNM3Q9UQ16 869 aa5.11□□□□□ -1.59
ECHDC1-217ENST00000488087 A0A1W2PR48 441 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 NPEPPSL1A6NEC2 478 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC26A4O43511 780 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 AKR1B10O60218 316 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 JUNP05412 331 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 CR2P20023 1033 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 CTSSP25774 331 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 ADCY7P51828 1080 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC16A1P53985 500 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 EPHB4P54760 987 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 HGFACQ04756 655 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 ODF1Q14990 250 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 UBE3CQ15386 1083 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 GAGE13Q4V321 117 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SLFN13Q68D06 897 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 TAS1R1Q7RTX1 841 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 RPTORQ8N122 1335 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 GIMAP8Q8ND71 665 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SHCBP1Q8NEM2 672 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 TEPSINQ96N21 525 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 PTPN18Q99952 460 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 DMRT3Q9NQL9 472 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 TLR9Q9NR96 1032 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 TCEAL9Q9UHQ7 104 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 SAP30BPQ9UHR5 308 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 OAZ3Q9UMX2 235 aa5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 THRAP3Q9Y2W1 955 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-217ENST00000488087 A0A1W2PRX2 142 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 PRICKLE3O43900 615 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 TMEM127O75204 238 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 IL33O95760 270 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 VSIG10L2P0DP72 767 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 GSPT1P15170 499 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 C5AR1P21730 350 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 ADSLP30566 484 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 RAB27AP51159 221 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 KIF23Q02241 960 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 DUSP2Q05923 314 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 PIN1Q13526 163 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 NOMO1Q15155 1222 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 TBC1D10BQ4KMP7 808 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 ZFYVE27Q5T4F4 411 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 GLB1LQ6UWU2 654 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 ABHD15Q6UXT9 468 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 TAX1BP1Q86VP1 789 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 MSL3Q8N5Y2 521 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 GPR156Q8NFN8 814 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 SNX33Q8WV41 574 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 RIN2Q8WYP3 895 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 CFHR4Q92496 578 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 RABGGTAQ92696 567 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 GNRHR2Q96P88 292 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 RBM12Q9NTZ6 932 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 ZIM2Q9NZV7 527 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 KLHL42Q9P2K6 505 aa5.09□□□□□ -1.59
ECHDC1-217ENST00000488087 E2F8A0AVK6 867 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 MATN2O00339 956 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 NRP1O14786 923 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 MTSS1O43312 755 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 AKAP10O43572 662 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 PHF2O75151 1096 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 PLATP00750 562 aa5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 ZSCAN20P17040 1043 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-217ENST00000488087 HOXA5P20719 270 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms