RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 PPP2R3BQ9Y5P8 575 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 TNKSO95271 1327 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 UBA6A0AVT1 1052 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 K7ESF4 209 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 MT-CO1P00395 513 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 HMGCRP04035 888 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 HSP90B1P14625 803 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 CD40P25942 277 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 ADRA1BP35368 520 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 SCAND1P57086 179 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 IL13RA1P78552 427 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 COL10A1Q03692 680 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 CRHR2Q13324 411 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 GRM7Q14831 915 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 NOLC1Q14978 699 aaKnown RBP eCLIP3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 WDR72Q3MJ13 1102 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 SYDE2Q5VT97 1194 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 PRAMEF9Q5VWM5 478 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 USP30Q70CQ3 517 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 CXorf67Q86X51 503 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 D2HGDHQ8N465 521 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 TGFBRAP1Q8WUH2 860 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 TUBGCP5Q96RT8 1024 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 FOXB1Q99853 325 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 ANO3Q9BYT9 981 aa3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 NOC2LQ9Y3T9 749 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-219ENST00000488035 PRSS38A1L453 326 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 PMS2P1A4D2B8 440 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 CAPN14A8MX76 684 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 ALDH1L1O75891 902 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 PRPF6O94906 941 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 APOL3O95236 402 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 KRT4P19013 534 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 ECE1P42892 770 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 GPR3P46089 330 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 MANFP55145 182 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 CT83Q5H943 113 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 TTC38Q5R3I4 469 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 KANK2Q63ZY3 851 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 SLFN12LQ6IEE8 588 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 Q6ZPA2 131 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 FRMD7Q6ZUT3 714 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 CXXC5Q7LFL8 322 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 PHYKPLQ8IUZ5 450 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 ZZZ3Q8IYH5 903 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 C7orf31Q8N865 590 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 LMBR1Q8WVP7 490 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 MAML3Q96JK9 1138 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 MPHOSPH9Q99550 1183 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 GALNT8Q9NY28 637 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 PTGFRNQ9P2B2 879 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 MAGEL2Q9UJ55 1249 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 TMPRSS11EQ9UL52 423 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 G3BP2Q9UN86 482 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 EDARQ9UNE0 448 aa3.92□□□□□ -1.78
R3HDM1-219ENST00000488035 GOLGA8AA7E2F4 631 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 GOLGA8BA8MQT2 603 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA12O60330 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 NUDT3O95989 172 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 GCP02774 474 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 LPLP06858 475 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 MYBL2P10244 700 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 ADCY8P40145 1251 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 CD83Q01151 205 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 FSTL1Q12841 308 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 KLF1Q13351 362 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 TRIM25Q14258 630 aaKnown RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCBP2Q15366 365 aaKnown RBP eCLIP3.91□□□□□ -1.782e-10■■■■□ 26
R3HDM1-219ENST00000488035 STILQ15468 1287 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PITRM1Q5JRX3 1037 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 ODR4Q5SWX8 454 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 CCDC62Q6P9F0 684 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 KANSL1Q7Z3B3 1105 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 LYSMD2Q8IV50 215 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 BCL6BQ8N143 479 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 CFHR4Q92496 578 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 EAF2Q96CJ1 260 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 OR10A5Q9H207 317 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 CCM2LQ9NUG4 571 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA9Q9Y5G4 932 aaKnown RBP3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA8Q9Y5G5 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA7Q9Y5G6 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA3Q9Y5H0 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 PCDHGA2Q9Y5H1 932 aa3.91□□□□□ -1.78
R3HDM1-219ENST00000488035 S100BP04271 92 aaPredicted RBP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ENPP1P22413 925 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 PTGS2P35354 604 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 MEOX1P50221 254 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 KCNQ1P51787 676 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ANTXR2P58335 489 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 SRSF2Q01130 221 aaKnown RBP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ROM1Q03395 351 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 MCL1Q07820 350 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ADCY2Q08462 1091 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ADCY1Q08828 1119 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 RRP1BQ14684 758 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms