RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 IFT122Q9HBG6 1241 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 TUFT1Q9NNX1 390 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 GPRC5CQ9NQ84 441 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 PRDM6Q9NQX0 595 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 ADGRA3Q8IWK6 1321 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 GPR182O15218 404 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 DGKIO75912 1065 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 SRGAP2CP0DJJ0 459 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 FGFR1P11362 822 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 ATF7P17544 494 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 RPA1P27694 616 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 CCT6AP40227 531 aaKnown RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 SARSP49591 514 aaKnown RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 DNM2P50570 870 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 ERVK-21P61565 698 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 GRIN1Q05586 938 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 RESTQ13127 1097 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 GRB10Q13322 594 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 CCDC85BQ15834 202 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 FAM102BQ5T8I3 360 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 MAEAQ7L5Y9 396 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 OTUD6AQ7L8S5 288 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 KCNK18Q7Z418 384 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 MICALL1Q8N3F8 863 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 SNX29Q8TEQ0 813 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 PSPC1Q8WXF1 523 aaKnown RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 PPM1EQ8WY54 764 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 SNX21Q969T3 373 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 ZNF689Q96CS4 500 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 TGS1Q96RS0 853 aaKnown RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 GAS2L1Q99501 681 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 POLR3CQ9BUI4 534 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 ATP6V0A4Q9HBG4 840 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 POLD4Q9HCU8 107 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 RGS18Q9NS28 235 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 ANKEF1Q9NU02 776 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 RNF19AQ9NV58 838 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 LRWD1Q9UFC0 647 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
UBE4B-209ENST00000487244 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
UBE4B-209ENST00000487244 XIRP2A4UGR9 3374 aa7.96□□□□□ -1.13
UBE4B-209ENST00000487244 VWA3AA6NCI4 1184 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 GLRA2P23416 452 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 PRPHP41219 470 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 CAPSQ13938 189 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 BTG3Q14201 252 aaPredicted RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 TUSC1Q2TAM9 212 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 EPC2Q52LR7 807 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 SLC24A5Q71RS6 500 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 ZNF410Q86VK4 478 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 RNF149Q8NC42 400 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 RNF169Q8NCN4 708 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 ERMNQ8TAM6 284 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 BSNDQ8WZ55 320 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 INTS4Q96HW7 963 aaKnown RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 CCDC43Q96MW1 224 aaKnown RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 PLIN2Q99541 437 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 JPH2Q9BR39 696 aaPredicted RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 GCOM2Q9BZD3 368 aaPredicted RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 POLR3FQ9H1D9 316 aaPredicted RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 DDX19AQ9NUU7 478 aaKnown RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
UBE4B-209ENST00000487244 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 MTMR6Q9Y217 621 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 PPME1Q9Y570 386 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 CLIC4Q9Y696 253 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 MTCH2Q9Y6C9 303 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 VCANP13611 3396 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 TTC28Q96AY4 2481 aa7.96□□□□□ -1.14
UBE4B-209ENST00000487244 TRIP11Q15643 1979 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 TBKBP1A7MCY6 615 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 E9PMD0 336 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 LAD1O00515 517 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 B4GALT5O43286 388 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 GAS2O43903 313 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 DGAT1O75907 488 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CSPG5O95196 566 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PDCP20941 246 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 SFPQP23246 707 aaKnown RBP eCLIP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CTNNB1P35222 781 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 ARL2P36404 184 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 FAM189BP81408 668 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PKP1Q13835 747 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 PDIA5Q14554 519 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 SF3A1Q15459 793 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 ZRSR1Q15695 479 aaKnown RBP7.95□□□□□ -1.14
UBE4B-209ENST00000487244 LONRF3Q496Y0 759 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CLLU1OSQ5K130 101 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 ODR4Q5SWX8 454 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 HAUS3Q68CZ6 603 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 DESI1Q6ICB0 168 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 DTHD1Q6ZMT9 781 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 CATSPER4Q7RTX7 472 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 ECHDC2Q86YB7 292 aa7.95□□□□□ -1.14
UBE4B-209ENST00000487244 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms