RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 GJA10Q969M2 543 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 RPS6KC1Q96S38 1066 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 ARHGEF3Q9NR81 526 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
PFDN4-204ENST00000487129 STK39Q9UEW8 545 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 PCDHB2Q9Y5E7 798 aa16.79■□□□□ 0.28
PFDN4-204ENST00000487129 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 STK25O00506 426 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 NRP1O14786 923 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 INPPL1O15357 1258 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 LRRN2O75325 713 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 SOD2P04179 222 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 HTR4Q13639 388 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 UBXN11Q5T124 520 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
PFDN4-204ENST00000487129 SLC5A5Q92911 643 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 NXPE3Q969Y0 559 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 RIT2Q99578 217 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 TMEM175Q9BSA9 504 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 FOXQ1Q9C009 403 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 SIT1Q9Y3P8 196 aa16.78■□□□□ 0.28
PFDN4-204ENST00000487129 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 F8W810 466 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 C2CD2LO14523 706 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 MYBP10242 640 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 LAMP2P13473 410 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 CDC42EP1Q00587 391 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 NONOQ15233 471 aaKnown RBP eCLIP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 RSPO4Q2I0M5 234 aaPredicted RBP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 MTERF2Q49AM1 385 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 ZC3H14Q6PJT7 736 aaKnown RBP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 SMG7Q92540 1137 aaKnown RBP16.77■□□□□ 0.28
PFDN4-204ENST00000487129 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 TCEAL9Q9UHQ7 104 aa16.77■□□□□ 0.28
PFDN4-204ENST00000487129 CHMP2AO43633 222 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 PSMD10O75832 226 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 GLUD1P00367 558 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 ADH1AP07327 375 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 SFNP31947 248 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 JAK3P52333 1124 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 AK2P54819 239 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 XKR3Q5GH77 459 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 CATSPER4Q7RTX7 472 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 RHPN2Q8IUC4 686 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 COLGALT2Q8IYK4 626 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
PFDN4-204ENST00000487129 STAMQ92783 540 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 RPP25Q9BUL9 199 aaKnown RBP16.76■□□□□ 0.27
PFDN4-204ENST00000487129 MINDY3Q9H8M7 445 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 RSAD1Q9HA92 442 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 SUCLA2Q9P2R7 463 aaPredicted RBP16.76■□□□□ 0.27
PFDN4-204ENST00000487129 SEPT9Q9UHD8 586 aaPredicted RBP16.76■□□□□ 0.27
PFDN4-204ENST00000487129 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
PFDN4-204ENST00000487129 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 GAS7O60861 476 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
PFDN4-204ENST00000487129 POMCP01189 267 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 ALDH2P05091 517 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 URODP06132 367 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 RCAN1P53805 252 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 STARD6P59095 220 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 DSC1Q08554 894 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 URGCPQ8TCY9 931 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 PGBD4Q96DM1 585 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 HINFPQ9BQA5 517 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
PFDN4-204ENST00000487129 NT5C3AQ9H0P0 336 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 CHST7Q9NS84 486 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 PRG3Q9Y2Y8 225 aaPredicted RBP16.75■□□□□ 0.27
PFDN4-204ENST00000487129 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
PFDN4-204ENST00000487129 SPATA31D3P0C874 917 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 RFX1P22670 979 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 GLUD2P49448 558 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 DSG1Q02413 1049 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 SPATA31D4Q6ZUB0 917 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 ANO5Q75V66 913 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
PFDN4-204ENST00000487129 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
PFDN4-204ENST00000487129 RDM1Q8NG50 284 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 CCDC136Q96JN2 1154 aa16.74■□□□□ 0.27
PFDN4-204ENST00000487129 DDX23Q9BUQ8 820 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms