RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 STMN3Q9NZ72 180 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 H2AFY2Q9P0M6 372 aaPredicted RBP13.12□□□□□ -0.31
ABCA2-218ENST00000487109 LIFRP42702 1097 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 PLD3Q8IV08 490 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 DCUN1D1Q96GG9 259 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.314e-8■■■□□ 17.1
ABCA2-218ENST00000487109 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
ABCA2-218ENST00000487109 H0Y3Z8 333 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 CHGBP05060 677 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 TAS2R42Q7RTR8 314 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 A0A087WUV0 522 aaPredicted RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 IKBKBO14920 756 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 MMEP08473 750 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 LRRC74AQ0VAA2 488 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 CCNYL1Q8N7R7 359 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF197O14709 1029 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 ADORA1P30542 326 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 DIS3Q9Y2L1 958 aaKnown RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 PYGMP11217 842 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 NAALADL2Q58DX5 795 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 MMP1P03956 469 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 RBM41Q96IZ5 413 aaKnown RBP13.11□□□□□ -0.31
ABCA2-218ENST00000487109 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
ABCA2-218ENST00000487109 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 FAM49AQ9H0Q0 323 aaPredicted RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 GTF2H3Q13889 308 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 FEM1BQ9UK73 627 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 CTIFO43310 598 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 HUS1O60921 280 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 IFNAR1P17181 557 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 RCAN1P53805 252 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF667Q5HYK9 610 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 FBXO2Q9UK22 296 aaPredicted RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TWF2Q6IBS0 349 aaKnown RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TADA1Q96BN2 335 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 SLC13A1Q9BZW2 595 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 THAP9Q9H5L6 903 aa13.1□□□□□ -0.31
ABCA2-218ENST00000487109 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
ABCA2-218ENST00000487109 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 NR1H3Q13133 447 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 KIF2CQ99661 725 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 KDM6BO15054 1643 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
ABCA2-218ENST00000487109 DYNC1I2Q13409 638 aaKnown RBP13.09□□□□□ -0.31
ABCA2-218ENST00000487109 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
ABCA2-218ENST00000487109 RHOT2Q8IXI1 618 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 ZNF341Q9BYN7 854 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 PRG3Q9Y2Y8 225 aaPredicted RBP13.09□□□□□ -0.31
ABCA2-218ENST00000487109 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
ABCA2-218ENST00000487109 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms