RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CD83Q01151 205 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 FHL2Q14192 279 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 EIF4HQ15056 248 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 PTF1AQ7RTS3 328 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 NLGN4XQ8N0W4 816 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 BCL6BQ8N143 479 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 ZBTB38Q8NAP3 1195 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 OR14A2Q96R54 314 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 INCENPQ9NQS7 918 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
SNRNP40-205ENST00000486941 CPSF1Q10570 1443 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 CASZ1Q86V15 1759 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 CCDC7Q96M83 1385 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 CHD4Q14839 1912 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 TRBV23-1A0A0A0MS06 115 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 PDPK1O15530 556 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 ARHGAP6O43182 974 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 LACTBP83111 547 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 GUCY1A3Q02108 690 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 HGFACQ04756 655 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 PCOLCEQ15113 449 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 HS1BP3Q53T59 392 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 FIGNQ5HY92 759 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 USP51Q70EK9 711 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 MAMDC2Q7Z304 686 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 UCKL1Q9NWZ5 548 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 ARHGAP28Q9P2N2 729 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 ABCC6O95255 1503 aa5.57□□□□□ -1.52
SNRNP40-205ENST00000486941 KTN1Q86UP2 1357 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 AQP7O14520 342 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 CLASP2O75122 1294 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 CRTAMO95727 393 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 MMEP08473 750 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 SLC15A2Q16348 729 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 SPTY2D1Q68D10 685 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 DPP8Q6V1X1 898 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 POLNQ7Z5Q5 900 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 MTDHQ86UE4 582 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 NOSTRINQ8IVI9 506 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 CACTINQ8WUQ7 758 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 SIN3AQ96ST3 1273 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 STK32BQ9NY57 414 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 NFAT5O94916 1531 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 MON2Q7Z3U7 1717 aa5.56□□□□□ -1.52
SNRNP40-205ENST00000486941 ROCK2O75116 1388 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 CCDC66A2RUB6 948 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 ZNF202O95125 648 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 HMGCRP04035 888 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 PTH1RQ03431 593 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 RASGRF1Q13972 1273 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 ZMAT1Q5H9K5 638 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 CXXC5Q7LFL8 322 aaKnown RBP5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 FILIP1Q7Z7B0 1213 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 C1orf210Q8IVY1 113 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 HOMEZQ8IX15 550 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 ASB15Q8WXK1 588 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 SCYL1Q96KG9 808 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 BTBD2Q9BX70 525 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 IKZF4Q9H2S9 585 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 USP54Q70EL1 1684 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 LTN1O94822 1766 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
SNRNP40-205ENST00000486941 NHSQ6T4R5 1651 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 PRAMEF25A6NGN4 478 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 IL2RBP14784 551 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 MSX2P35548 267 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 ECE1P42892 770 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 MRE11P49959 708 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 DNM2P50570 870 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 HERVK_113P62684 666 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 MOGSQ13724 837 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 ACAP1Q15027 740 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 LSM12Q3MHD2 195 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 TMEM200BQ69YZ2 307 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 USP30Q70CQ3 517 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 CHFRQ96EP1 664 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SCLYQ96I15 445 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 PUS7Q96PZ0 661 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SYT17Q9BSW7 474 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 MTFR1LQ9H019 292 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 C12orf65Q9H3J6 166 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 SLC52A2Q9HAB3 445 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 PLA2G3Q9NZ20 509 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 CEP72Q9P209 647 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 TNS2Q63HR2 1409 aa5.54□□□□□ -1.52
SNRNP40-205ENST00000486941 MYOM1P52179 1685 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 BTAF1O14981 1849 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 FAM221BA6H8Z2 402 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 SCDO00767 359 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 ACRV1P26436 265 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 GJA4P35212 333 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 STAT5BP51692 787 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms