RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 RFX8Q6ZV50 586 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 DCCP43146 1447 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 MSH4O15457 936 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 RIPK2O43353 540 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 MYL7Q01449 175 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 SEPT2Q15019 361 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 EMC10Q5UCC4 262 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 CLEC4GQ6UXB4 293 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 ZNF570Q96NI8 536 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 C12orf65Q9H3J6 166 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 ETNK1Q9HBU6 452 aa13.32□□□□□ -0.28
HSPG2-211ENST00000486901 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 SCAF8Q9UPN6 1271 aaKnown RBP13.32□□□□□ -0.28
HSPG2-211ENST00000486901 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SORBS3O60504 671 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 BRAFP15056 766 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SLC8A1P32418 973 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SLCO1B3Q9NPD5 702 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 TTC7AQ9ULT0 858 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 LRP5O75197 1615 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 O00370 1275 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SNX3O60493 162 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 NQO1P15559 274 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 VCAM1P19320 739 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 STX2P32856 288 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 JAM2P57087 298 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 PPP4CP60510 307 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SLFN11Q7Z7L1 901 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 CNOT10Q9H9A5 744 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 EMSYQ7Z589 1322 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 ESYT2A0FGR8 921 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 MEIS2O14770 477 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 PSMC4P43686 418 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 DRP2Q13474 957 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 SLC47A2Q86VL8 602 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
HSPG2-211ENST00000486901 POC1B-GALNT4F8VUJ3 575 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 GJB6O95452 261 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 CETPP11597 493 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 CHRNB2P17787 502 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 DNAJC3Q13217 504 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 TMED2Q15363 201 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 SEL1L2Q5TEA6 688 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 TGS1Q96RS0 853 aaKnown RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 PDXKO00764 312 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 PPATQ06203 517 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 CBWD1Q9BRT8 395 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 NKX1-2Q9UD57 310 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 GGA1Q9UJY5 639 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 TRAF3IP3Q9Y228 551 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 THAP12O43422 761 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 DNAJC8O75937 253 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 LMNB1P20700 586 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 PTGIRP43119 386 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 KRT17Q04695 432 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 LRCH2Q5VUJ6 765 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 LMBRD2Q68DH5 695 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 HS2ST1Q7LGA3 356 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 C4orf33Q8N1A6 199 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 SYT2Q8N9I0 419 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-211ENST00000486901 ERMNQ8TAM6 284 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 ZBTB10Q96DT7 871 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 KIFC3Q9BVG8 833 aa13.3□□□□□ -0.28
HSPG2-211ENST00000486901 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms