RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CEP89Q96ST8 783 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 RMDN3Q96TC7 470 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 INCENPQ9NQS7 918 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 NOP53Q9NZM5 478 aaKnown RBP7.75□□□□□ -1.17
HDAC3-209ENST00000486618 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
HDAC3-209ENST00000486618 MRVI1Q9Y6F6 885 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 MYH6P13533 1939 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 ABCB11O95342 1321 aa7.75□□□□□ -1.17
HDAC3-209ENST00000486618 C17orf102A2RUQ5 167 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 TGFBR3LH3BV60 316 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 STXBP3O00186 592 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 MBTPS2O43462 519 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 CAND2O75155 1236 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 CTNNB1P35222 781 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 LTBRP36941 435 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 ZNF200P98182 395 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 SMAD4Q13485 552 aaKnown RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 ALX1Q15699 326 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 UVSSAQ2YD98 709 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 TTC39BQ5VTQ0 682 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 TSHZ3Q63HK5 1081 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 JAZF1Q86VZ6 243 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 APBB2Q92870 758 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 ATP6V0A1Q93050 837 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 WNT8BQ93098 351 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 TRIM11Q96F44 468 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 C11orf84Q9BUA3 381 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 BACH2Q9BYV9 841 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 IFIH1Q9BYX4 1025 aaKnown RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 DCTPP1Q9H773 170 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 MUTYHQ9UIF7 546 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 CD207Q9UJ71 328 aa7.74□□□□□ -1.17
HDAC3-209ENST00000486618 MRPL11Q9Y3B7 192 aaKnown RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 RIF1Q5UIP0 2472 aaKnown RBP7.74□□□□□ -1.17
HDAC3-209ENST00000486618 TMEM221A6NGB7 291 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 C5orf67F2Z3F1 127 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 M0R296 226 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 IFRD1O00458 451 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 PPP1R12AO14974 1030 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 PDGFRBP09619 1106 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 SNHG28P0DPA3 235 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 HSPD1P10809 573 aaKnown RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 GNAT1P11488 350 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 PCP11498 1178 aaKnown RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 HOXD8P13378 290 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 FLT3P36888 993 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 BMPR1AP36894 532 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 ADH7P40394 386 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 TERF1P54274 439 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 CDC37Q16543 378 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 CCDC178Q5BJE1 867 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 CC2D1AQ6P1N0 951 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 PRSS33Q8NF86 280 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 RSPH1Q8WYR4 309 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 TBC1D5Q92609 795 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 BHMTQ93088 406 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 RELTQ969Z4 430 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 SPATA33Q96N06 139 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 KLK14Q9P0G3 267 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 DMGDHQ9UI17 866 aaKnown RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 NOVA2Q9UNW9 492 aaKnown RBP7.73□□□□□ -1.17
HDAC3-209ENST00000486618 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 FAM186AA6NE01 2351 aa7.73□□□□□ -1.17
HDAC3-209ENST00000486618 ZFHX2Q9C0A1 2572 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 SPTBN4Q9H254 2564 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 H3BRB1 525 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 FOXP2O15409 715 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 GOLGA8HP0CJ92 632 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 TGFB3P10600 412 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 ATICP31939 592 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 HYAL1Q12794 435 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 PSMD2Q13200 908 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 CLUL1Q15846 466 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 CCDC92Q53HC0 331 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 CELF3Q5SZQ8 465 aaKnown RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 MFSD6Q6ZSS7 791 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 ANKS1AQ92625 1134 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 ZNF830Q96NB3 372 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 PLVAPQ9BX97 442 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 RNF41Q9H4P4 317 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 IGFLR1Q9H665 355 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 TUT1Q9H6E5 874 aaKnown RBP7.72□□□□□ -1.17
HDAC3-209ENST00000486618 MLXIPQ9HAP2 919 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 PXMP2Q9NR77 195 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 HELLSQ9NRZ9 838 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 COL20A1Q9P218 1284 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 STARD13Q9Y3M8 1113 aa7.72□□□□□ -1.17
HDAC3-209ENST00000486618 TTC3P53804 2025 aa7.71□□□□□ -1.17
HDAC3-209ENST00000486618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 M0R082 166 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
HDAC3-209ENST00000486618 GRM6O15303 877 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 TREHO43280 583 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 HIP1RO75146 1068 aa7.71□□□□□ -1.18
HDAC3-209ENST00000486618 EYA4O95677 639 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms