RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 LRRC43Q8N309 656 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 HELQQ8TDG4 1101 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 RSPH1Q8WYR4 309 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 RAD54LQ92698 747 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 PGBD4Q96DM1 585 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 CASD1Q96PB1 797 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 C11orf84Q9BUA3 381 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-207ENST00000486572 KIFC3Q9BVG8 833 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 PLVAPQ9BX97 442 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 CCDC113Q9H0I3 377 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 FZD8Q9H461 694 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 C17orf75Q9HAS0 396 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 DAXXQ9UER7 740 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-207ENST00000486572 MTCH2Q9Y6C9 303 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 KIAA1671Q9BY89 1806 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 PRKCBP05771 671 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 NPTX2P47972 431 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 PEX3P56589 373 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 RAD51AP2Q09MP3 1159 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 GPM6BQ13491 265 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 GPBP1Q86WP2 473 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 CNNM3Q8NE01 707 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 LARP4BQ92615 738 aaKnown RBP20.09■□□□□ 0.81
COL1A1-207ENST00000486572 LPPQ93052 612 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 LMCD1Q9NZU5 365 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 STK17AQ9UEE5 414 aa20.09■□□□□ 0.81
COL1A1-207ENST00000486572 A0A1B0GUA9 196 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 CCDC169A6NNP5 214 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 PRPF4BQ13523 1007 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 MCM6Q14566 821 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 LONRF3Q496Y0 759 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 ARSHQ5FYA8 562 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 SPOUT1Q5T280 376 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 SLC27A1Q6PCB7 646 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 GLB1LQ6UWU2 654 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 MRPL10Q7Z7H8 261 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 MICALL1Q8N3F8 863 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 KCNG4Q8TDN1 519 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 P2RX5Q93086 422 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 EIF2AQ9BY44 585 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 MRPL9Q9BYD2 267 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 AAASQ9NRG9 546 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 TYW1Q9NV66 732 aaKnown RBP20.08■□□□□ 0.81
COL1A1-207ENST00000486572 HCSTQ9UBK5 93 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 ODF2LQ9ULJ1 636 aa20.08■□□□□ 0.81
COL1A1-207ENST00000486572 PHLPP2Q6ZVD8 1323 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 COL6A3P12111 3177 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 MEIS3P2A8K0S8 358 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 ACKR2O00590 384 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 PLS3P13797 630 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 LIG1P18858 919 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
COL1A1-207ENST00000486572 DNM1Q05193 864 aaKnown RBP20.07■□□□□ 0.8
COL1A1-207ENST00000486572 PTPROQ16827 1216 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 TMEM132AQ24JP5 1023 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 NAALADL2Q58DX5 795 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 RRAGBQ5VZM2 374 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 REEP2Q9BRK0 252 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 TRIM6Q9C030 488 aaPredicted RBP20.07■□□□□ 0.8
COL1A1-207ENST00000486572 CWH43Q9H720 699 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 KMT5AQ9NQR1 393 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 KCNG1Q9UIX4 513 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 IPPQ9Y573 584 aa20.07■□□□□ 0.8
COL1A1-207ENST00000486572 NPHP3-ACAD11A0A0J9YXS1 232 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 SFI1A8K8P3 1242 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 N4BP3O15049 544 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 CUTAO60888 179 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 LAG3P18627 525 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 DDIT3P35638 169 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
COL1A1-207ENST00000486572 AGMOQ6ZNB7 445 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 CCDC73Q6ZRK6 1079 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 CDR2LQ86X02 465 aaPredicted RBP20.06■□□□□ 0.8
COL1A1-207ENST00000486572 SMG8Q8ND04 991 aaKnown RBP20.06■□□□□ 0.8
COL1A1-207ENST00000486572 SPIRE2Q8WWL2 714 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 PPM1EQ8WY54 764 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 RSAD1Q9HA92 442 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 ARHGAP28Q9P2N2 729 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 RBM19Q9Y4C8 960 aaKnown RBP20.06■□□□□ 0.8
COL1A1-207ENST00000486572 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
COL1A1-207ENST00000486572 TTLL13PA6NNM8 815 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 K7ERI5 159 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 NPTXRO95502 500 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 EDN1P05305 212 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 KRT18P05783 430 aaKnown RBP20.05■□□□□ 0.8
COL1A1-207ENST00000486572 ITGA4P13612 1032 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 CCDC85BQ15834 202 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-207ENST00000486572 CSPP1Q1MSJ5 1256 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 HACE1Q8IYU2 909 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 KLHL23Q8NBE8 558 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 COLGALT1Q8NBJ5 622 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 MRPL38Q96DV4 380 aaKnown RBP20.05■□□□□ 0.8
COL1A1-207ENST00000486572 NTPCRQ9BSD7 190 aaKnown RBP20.05■□□□□ 0.8
COL1A1-207ENST00000486572 LMAN2LQ9H0V9 348 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms