RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CYP4A11Q02928 519 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 RUNX1T1Q06455 604 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 R3HDM1Q15032 1099 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 C16orf89Q6UX73 402 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 CCNYL1Q8N7R7 359 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 SNF8Q96H20 258 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 TMEM245Q9H330 911 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 CHMP2BQ9UQN3 213 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 KIF1AQ12756 1690 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 RASSF9O75901 435 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 YY1P25490 414 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 HOXA7P31268 230 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 CYP27A1Q02318 531 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 GGT7Q9UJ14 662 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 AFF2P51816 1311 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 TCP11X1B4DZS4 312 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 M0R3G1 203 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ZBTB22O15209 634 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 PRAMEP78395 509 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 PABPC4Q13310 644 aaKnown RBP eCLIP9.3□□□□□ -0.92
GABRE-209ENST00000486255 CDO1Q16878 200 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 DNAL1Q4LDG9 190 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 FAM196AQ6ZSG2 479 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 LRRC47Q8N1G4 583 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 OTUB1Q96FW1 271 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 PAGE5Q96GU1 130 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 RBM41Q96IZ5 413 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 HEXIM2Q96MH2 286 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 PRPF18Q99633 342 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 SLC13A1Q9BZW2 595 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 CASS4Q9NQ75 786 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 MPP6Q9NZW5 540 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 LCMT1Q9UIC8 334 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 PRG3Q9Y2Y8 225 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 TNKSO95271 1327 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 CRB1P82279 1406 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 XPO1O14980 1071 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 IMPDH2P12268 514 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ALAS1P13196 640 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 TCF3P15923 654 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ST13P50502 369 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 KRT17Q04695 432 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 DMPKQ09013 629 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 KHDRBS2Q5VWX1 349 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 CLEC4FQ8N1N0 589 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 RUBCNQ92622 972 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 WWP1Q9H0M0 922 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 AS3MTQ9HBK9 375 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 NFKBIL1Q9UBC1 381 aaPredicted RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 ABCD1P33897 745 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 MRPS35P82673 323 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 TRIM25Q14258 630 aaKnown RBP9.3□□□□□ -0.92
GABRE-209ENST00000486255 GCKRQ14397 625 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 BTN2A2Q8WVV5 523 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 NDEL1Q9GZM8 345 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 KLHL25Q9H0H3 589 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 USP40Q9NVE5 1235 aa9.3□□□□□ -0.92
GABRE-209ENST00000486255 HNRNPRO43390 633 aaKnown RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 CDH2P19022 906 aaPredicted RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 MDH1P40925 334 aaKnown RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 NR5A1Q13285 461 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 FAM47CQ5HY64 1035 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ULK4Q96C45 1275 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 GOLGA8RI6L899 631 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 MYO1DO94832 1006 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ZNF18P17022 549 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 KDSRQ06136 332 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 LVRNQ6Q4G3 990 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 RRM2BQ7LG56 351 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 GINS4Q9BRT9 223 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ZNF577Q9BSK1 485 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 CARD9Q9H257 536 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 CYP26B1Q9NR63 512 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ABHD10Q9NUJ1 306 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 NFIBO00712 420 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 FKBP3Q00688 224 aaKnown RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
GABRE-209ENST00000486255 ERICH1Q86X53 443 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 GALNT4Q8N4A0 578 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 CMTM5Q96DZ9 223 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 LRRC4Q9HBW1 653 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 STRNO43815 780 aa9.29□□□□□ -0.92
GABRE-209ENST00000486255 ARIH2O95376 493 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms