RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
PKP4-213ENST00000486254 NAGPAQ9UK23 515 aa13□□□□□ -0.33
PKP4-213ENST00000486254 SNX12Q9UMY4 172 aa13□□□□□ -0.33
PKP4-213ENST00000486254 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
PKP4-213ENST00000486254 ADGRA3Q8IWK6 1321 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ASB14A6NK59 587 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 SOCS7O14512 581 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 EVI5O60447 810 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ZC3H11AO75152 810 aaKnown RBP eCLIP12.99□□□□□ -0.33
PKP4-213ENST00000486254 ATP1A1P05023 1023 aaKnown RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 TRIM49CP0CI26 452 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ERVK-9P63128 1117 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 CLDN10P78369 228 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 APBA1Q02410 837 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 BRD3Q15059 726 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 SLFN12LQ6IEE8 588 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 PLPPR4Q7Z2D5 763 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 PCYT2Q99447 389 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 MMP19Q99542 508 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
PKP4-213ENST00000486254 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 RAB21Q9UL25 225 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
PKP4-213ENST00000486254 CES2O00748 559 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 ADRB2P07550 413 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 CETPP11597 493 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 GCLCP48506 637 aaPredicted RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 GPC3P51654 580 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 PPP3CAQ08209 521 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 KIAA0753Q2KHM9 967 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 CELF3Q5SZQ8 465 aaKnown RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 KRT39Q6A163 491 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 SLC39A4Q6P5W5 647 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 SLC30A5Q8TAD4 765 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 HNRNPLLQ8WVV9 542 aaKnown RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 GPR88Q9GZN0 384 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 MORF4L1Q9UBU8 362 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.98□□□□□ -0.33
PKP4-213ENST00000486254 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 V9GYY5 206 aaPredicted RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 GGPS1O95749 300 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 MCM3P25205 808 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 GJA5P36382 358 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 STAT5BP51692 787 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 GTF2A2P52657 109 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 EFNA5P52803 228 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 FSTL1Q12841 308 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 IRF5Q13568 498 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 TAS1R3Q7RTX0 852 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 ANKRD23Q86SG2 305 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 OLIG1Q8TAK6 271 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 TCP11Q8WWU5 503 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 TMEM117Q9H0C3 514 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
PKP4-213ENST00000486254 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
PKP4-213ENST00000486254 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 NCANO14594 1321 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 TISP43B9A030 160 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 ANKRD63C9JTQ0 380 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 STRNO43815 780 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 EXTL3O43909 919 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 GLRA2P23416 452 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 CLCN6P51797 869 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 STRN3Q13033 797 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 CDCA2Q69YH5 1023 aaPredicted RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 PHLDB3Q6NSJ2 640 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 MOB2Q70IA6 237 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
PKP4-213ENST00000486254 PLEKHO2Q8TD55 490 aa12.97□□□□□ -0.33
PKP4-213ENST00000486254 ATP8B4Q8TF62 1192 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms