RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
XRN1-212ENST00000486211 PI4K2BQ8TCG2 481 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 OSMRQ99650 979 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 KAT14Q9H8E8 782 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 MAN1C1Q9NR34 630 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 RAB23Q9ULC3 237 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 ZMYM6O95789 1325 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 SHISA7A6NL88 538 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 INPPL1O15357 1258 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 GPR32O75388 356 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 RFPL2O75678 378 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.9
XRN1-212ENST00000486211 ITGB5P18084 799 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 CD72P21854 359 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 KLRC1P26715 233 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 KLRC2P26717 231 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 CRYBB1P53674 252 aaPredicted RBP9.46□□□□□ -0.9
XRN1-212ENST00000486211 KIZQ2M2Z5 673 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 IL31Q6EBC2 164 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 RSPO2Q6UXX9 243 aaPredicted RBP9.46□□□□□ -0.9
XRN1-212ENST00000486211 MFSD6Q6ZSS7 791 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 NLRX1Q86UT6 975 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 CYP4X1Q8N118 509 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
XRN1-212ENST00000486211 FGF14Q92915 247 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 GPRASP2Q96D09 838 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 GPATCH3Q96I76 525 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 MYL10Q9BUA6 226 aa9.46□□□□□ -0.9
XRN1-212ENST00000486211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.9
XRN1-212ENST00000486211 MAST4O15021 2626 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 TMEM8BA6NDV4 472 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 KLRF2D3W0D1 207 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
XRN1-212ENST00000486211 B4GALT3O60512 393 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 ZC3H11AO75152 810 aaKnown RBP eCLIP9.45□□□□□ -0.9
XRN1-212ENST00000486211 KCNK5O95279 499 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 GALTP07902 379 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
XRN1-212ENST00000486211 MTAPQ13126 283 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 ZBTB41Q5SVQ8 909 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 PARM1Q6UWI2 310 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 GET4Q7L5D6 327 aaPredicted RBP9.45□□□□□ -0.9
XRN1-212ENST00000486211 PLPPR4Q7Z2D5 763 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
XRN1-212ENST00000486211 ESR2Q92731 530 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 GATA6Q92908 595 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 PPP1R16BQ96T49 567 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 EMILIN2Q9BXX0 1053 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 MRPL9Q9BYD2 267 aaKnown RBP9.45□□□□□ -0.9
XRN1-212ENST00000486211 RXFP3Q9NSD7 469 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 TOR4AQ9NXH8 423 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 MAD2L2Q9UI95 211 aa9.45□□□□□ -0.9
XRN1-212ENST00000486211 WDFY3Q8IZQ1 3526 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 FOXD2O60548 495 aaPredicted RBP9.44□□□□□ -0.9
XRN1-212ENST00000486211 SOWAHCQ53LP3 525 aaPredicted RBP9.44□□□□□ -0.9
XRN1-212ENST00000486211 PRR23BQ6ZRT6 265 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 RNF169Q8NCN4 708 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 TNPO1Q92973 898 aaKnown RBP9.44□□□□□ -0.9
XRN1-212ENST00000486211 CDHR1Q96JP9 859 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 PIGSQ96S52 555 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 ZSCAN10Q96SZ4 725 aaPredicted RBP9.44□□□□□ -0.9
XRN1-212ENST00000486211 RIOX1Q9H6W3 641 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
XRN1-212ENST00000486211 RALGAPA1Q6GYQ0 2036 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 NBEAQ8NFP9 2946 aa9.44□□□□□ -0.9
XRN1-212ENST00000486211 TTC41PQ6P2S7 1318 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 PALM3A6NDB9 673 aaPredicted RBP9.43□□□□□ -0.9
XRN1-212ENST00000486211 CYSRT1A8MQ03 144 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 CYTH3O43739 400 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 SSBP05455 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
XRN1-212ENST00000486211 MYBP10242 640 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 CD46P15529 392 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 SPINK2P20155 84 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 SLC11A1P49279 550 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 STAT5BP51692 787 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 NRLP54845 237 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 CCDC178Q5BJE1 867 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 KRI1Q8N9T8 703 aaKnown RBP9.43□□□□□ -0.9
XRN1-212ENST00000486211 LSM14BQ9BX40 385 aaKnown RBP9.43□□□□□ -0.9
XRN1-212ENST00000486211 AZI2Q9H6S1 392 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
XRN1-212ENST00000486211 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 TBC1D13Q9NVG8 400 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 DNAJB4Q9UDY4 337 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 UBIAD1Q9Y5Z9 338 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 SMG1Q96Q15 3661 aaKnown RBP9.43□□□□□ -0.9
XRN1-212ENST00000486211 EVPLQ92817 2033 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 GREB1Q4ZG55 1949 aa9.43□□□□□ -0.9
XRN1-212ENST00000486211 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
XRN1-212ENST00000486211 COL1A2P08123 1366 aa9.42□□□□□ -0.9
XRN1-212ENST00000486211 A0A0D9SFI3 127 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms