RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 TCP11Q8WWU5 503 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 PRPF31Q8WWY3 499 aaKnown RBP14.33□□□□□ -0.12
SSR4-211ENST00000486204 PSPC1Q8WXF1 523 aaKnown RBP14.33□□□□□ -0.12
SSR4-211ENST00000486204 CCDC43Q96MW1 224 aaKnown RBP14.33□□□□□ -0.12
SSR4-211ENST00000486204 PLIN2Q99541 437 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 FDXACB1Q9BRP7 624 aaPredicted RBP14.33□□□□□ -0.12
SSR4-211ENST00000486204 NT5C3AQ9H0P0 336 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 TMX1Q9H3N1 280 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 IFT122Q9HBG6 1241 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 GPRC5CQ9NQ84 441 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 BLOC1S4Q9NUP1 217 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
SSR4-211ENST00000486204 PDCD11Q14690 1871 aaKnown RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 ARHGEF35A5YM69 484 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 GRM6O15303 877 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 LINC01565O15544 149 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 RB1P06400 928 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 DARSP14868 501 aaKnown RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 CYP11B2P19099 503 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 PLCG1P19174 1290 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 GLRA2P23416 452 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 EIF4BP23588 611 aaKnown RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 CTNNB1P35222 781 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 UBA7P41226 1012 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 NUBP1P53384 320 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 LAMTOR4Q0VGL1 99 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 PAK2Q13177 524 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 ADAM15Q13444 863 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 CAPSQ13938 189 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 CBX2Q14781 532 aaPredicted RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 KARSQ15046 597 aaKnown RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
SSR4-211ENST00000486204 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 ASAP3Q8TDY4 903 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 NLRP7Q8WX94 980 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 ASIC4Q96FT7 647 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 DNM3Q9UQ16 869 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 DCHS1Q96JQ0 3298 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 CITO14578 2027 aa14.32□□□□□ -0.12
SSR4-211ENST00000486204 A0A087X0B3 334 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 C5orf67F2Z3F1 127 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 MGEA5O60502 916 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 RPS6KA5O75582 802 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 NDUFV1P49821 464 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 SLC12A3P55017 1021 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 MAPK7Q13164 816 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 RTN4RL1Q86UN2 441 aaPredicted RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 FIBCD1Q8N539 461 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 CALML4Q96GE6 196 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 CDK5RAP3Q96JB5 506 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 MSLNLQ96KJ4 702 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 NLRP4Q96MN2 994 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 C11orf84Q9BUA3 381 aaPredicted RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 RUSC1Q9BVN2 902 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 POLR3FQ9H1D9 316 aaPredicted RBP14.31□□□□□ -0.12
SSR4-211ENST00000486204 MINDY3Q9H8M7 445 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 RCOR1Q9UKL0 485 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 ST3GAL5Q9UNP4 418 aa14.31□□□□□ -0.12
SSR4-211ENST00000486204 PLXNA3P51805 1871 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 ASAP2O43150 1006 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 GALR2O43603 387 aaPredicted RBP14.3□□□□□ -0.12
SSR4-211ENST00000486204 CUTAO60888 179 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 CSDE1O75534 798 aaKnown RBP14.3□□□□□ -0.12
SSR4-211ENST00000486204 FGFR4P22455 802 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 BMPR1AP36894 532 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 ANP32AP39687 249 aaKnown RBP14.3□□□□□ -0.12
SSR4-211ENST00000486204 NBL1P41271 181 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 NUCB2P80303 420 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 CDC42EP1Q00587 391 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 DSC3Q14574 896 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 MXD4Q14582 209 aaPredicted RBP14.3□□□□□ -0.12
SSR4-211ENST00000486204 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 RINT1Q6NUQ1 792 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 SHC4Q6S5L8 630 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 MAEAQ7L5Y9 396 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 DAW1Q8N136 415 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 GCOM2Q9BZD3 368 aaPredicted RBP14.3□□□□□ -0.12
SSR4-211ENST00000486204 PCDHA7Q9UN72 937 aa14.3□□□□□ -0.12
SSR4-211ENST00000486204 PLXNA4Q9HCM2 1894 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 PTPRZ1P23471 2315 aaPredicted RBP14.29□□□□□ -0.12
SSR4-211ENST00000486204 GPR182O15218 404 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 CSPG5O95196 566 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 PLA2G4BP0C869 781 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 KRT85P78386 507 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 POU5F1BQ06416 359 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
SSR4-211ENST00000486204 ARSHQ5FYA8 562 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 CRIPAKQ8N1N5 446 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
SSR4-211ENST00000486204 LEO1Q8WVC0 666 aaPredicted RBP14.29□□□□□ -0.12
SSR4-211ENST00000486204 RAD54LQ92698 747 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms