RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SYCP1Q15431 976 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 DCAF17Q5H9S7 520 aaPredicted RBP10.42□□□□□ -0.74
CTSA-208ENST00000485627 MIIPQ5JXC2 388 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 C12orf56Q8IXR9 622 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 LRRC71Q8N4P6 559 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 XXYLT1Q8NBI6 393 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 ZNF397Q8NF99 534 aaPredicted RBP10.42□□□□□ -0.74
CTSA-208ENST00000485627 SH3TC2Q8TF17 1288 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 PRPF31Q8WWY3 499 aaKnown RBP10.42□□□□□ -0.74
CTSA-208ENST00000485627 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 ERGIC2Q96RQ1 377 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 C16orf70Q9BSU1 422 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 KATNAL1Q9BW62 490 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 PCIF1Q9H4Z3 704 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 DMAC2Q9NW81 257 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 ARHGAP28Q9P2N2 729 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
CTSA-208ENST00000485627 MYH11P35749 1972 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 ZBTB42B2RXF5 422 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
CTSA-208ENST00000485627 ADCY3O60266 1144 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 ZEB2O60315 1214 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
CTSA-208ENST00000485627 MYL3P08590 195 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 SRGAP2CP0DJJ0 459 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 MATR3P43243 847 aaKnown RBP eCLIP10.41□□□□□ -0.74
CTSA-208ENST00000485627 CASP4P49662 377 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 CLCN3P51790 818 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 ADKP55263 362 aaKnown RBP10.41□□□□□ -0.74
CTSA-208ENST00000485627 RBL2Q08999 1139 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 LAMTOR4Q0VGL1 99 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 LRMPQ12912 555 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 CAPSQ13938 189 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 GRIK4Q16099 956 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 INTS8Q75QN2 995 aaKnown RBP10.41□□□□□ -0.74
CTSA-208ENST00000485627 USP37Q86T82 979 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 RHPN2Q8IUC4 686 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 RNF149Q8NC42 400 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 NEK11Q8NG66 645 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 TRAPPC12Q8WVT3 735 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 CCDC51Q96ER9 411 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 MAP7D2Q96T17 732 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 IKZF4Q9H2S9 585 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 MMRN2Q9H8L6 949 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 HSPBP1Q9NZL4 362 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 AKT3Q9Y243 479 aa10.41□□□□□ -0.74
CTSA-208ENST00000485627 LUC7L2Q9Y383 392 aaKnown RBP10.41□□□□□ -0.74
CTSA-208ENST00000485627 COL6A3P12111 3177 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 ADGRA3Q8IWK6 1321 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 SOX1O00570 391 aaPredicted RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 KIAA0391O15091 583 aaKnown RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 MAPK13O15264 365 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 ADCY6O43306 1168 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 KPNA6O60684 536 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 MFAP3LO75121 409 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 C22orf31O95567 290 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 GNRH1P01148 92 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 RARBP10826 455 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 CYBAP13498 195 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 GARTP22102 1010 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 CASP14P31944 242 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 PHKA2P46019 1235 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 PSEN2P49810 448 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 CETN1Q12798 172 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 MFSD10Q14728 455 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 FSCN1Q16658 493 aaKnown RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 MAPK6Q16659 721 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 TMEM132AQ24JP5 1023 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 SLFN12LQ6IEE8 588 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 RAET1EQ8TD07 263 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 TMEM174Q8WUU8 243 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 TRIB2Q92519 343 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 KCNN1Q92952 543 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 LENG1Q96BZ8 264 aaPredicted RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 NLRP4Q96MN2 994 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 PANX2Q96RD6 677 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 BAG1Q99933 345 aaPredicted RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 CBWD1Q9BRT8 395 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 NAA15Q9BXJ9 866 aaKnown RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 MRPL4Q9BYD3 311 aaKnown RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 KIAA1586Q9HCI6 787 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.74
CTSA-208ENST00000485627 SRRDQ9UH36 339 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 WDR81Q562E7 1941 aa10.4□□□□□ -0.74
CTSA-208ENST00000485627 ZSWIM8A7E2V4 1837 aa10.4□□□□□ -0.75
CTSA-208ENST00000485627 ARID2Q68CP9 1835 aa10.4□□□□□ -0.75
CTSA-208ENST00000485627 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
CTSA-208ENST00000485627 SEPT4O43236 478 aa10.39□□□□□ -0.75
CTSA-208ENST00000485627 STX10O60499 249 aa10.39□□□□□ -0.75
CTSA-208ENST00000485627 N4BP1O75113 896 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms