RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MXD4Q14582 209 aaPredicted RBP28.63■■■□□ 2.17
HLA-F-227ENST00000485513 UBXN11Q5T124 520 aa28.63■■■□□ 2.17
HLA-F-227ENST00000485513 ZBP1Q9H171 429 aa28.63■■■□□ 2.17
HLA-F-227ENST00000485513 HCFC2Q9Y5Z7 792 aa28.63■■■□□ 2.17
HLA-F-227ENST00000485513 ERLIN2O94905 339 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 DDX53Q86TM3 631 aaKnown RBP28.62■■■□□ 2.17
HLA-F-227ENST00000485513 EDAQ92838 391 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 CCDC43Q96MW1 224 aaKnown RBP28.62■■■□□ 2.17
HLA-F-227ENST00000485513 MTMR9Q96QG7 549 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 RSAD1Q9HA92 442 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 DNAJB4Q9UDY4 337 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 CNTNAP2Q9UHC6 1331 aa28.62■■■□□ 2.17
HLA-F-227ENST00000485513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.61■■■□□ 2.17
HLA-F-227ENST00000485513 CLASP2O75122 1294 aaKnown RBP28.61■■■□□ 2.17
HLA-F-227ENST00000485513 DGAT1O75907 488 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 SLC11A1P49279 550 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 PTENP60484 403 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 TFDP1Q14186 410 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 PCBP1Q15365 356 aaKnown RBP eCLIP28.61■■■□□ 2.17
HLA-F-227ENST00000485513 TPRNQ4KMQ1 711 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 ZNF280BQ86YH2 543 aa28.61■■■□□ 2.17
HLA-F-227ENST00000485513 BCL7CQ8WUZ0 217 aaPredicted RBP28.61■■■□□ 2.17
HLA-F-227ENST00000485513 SAFBQ15424 915 aaKnown RBP eCLIP28.6■■■□□ 2.17
HLA-F-227ENST00000485513 HFE2Q6ZVN8 426 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 TMEM87AQ8NBN3 555 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 AUTS2Q8WXX7 1259 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 KANSL3Q9P2N6 904 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 LIMCH1Q9UPQ0 1083 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 MUC6Q6W4X9 2439 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 TECTAO75443 2155 aa28.6■■■□□ 2.17
HLA-F-227ENST00000485513 B4GALT3O60512 393 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 CTSAP10619 480 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 NCLP19338 710 aaKnown RBP28.59■■■□□ 2.17
HLA-F-227ENST00000485513 ATP2B1P20020 1258 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 AXLP30530 894 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 RARRES1P49788 294 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 GUCY1B3Q02153 619 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 POU5F1BQ06416 359 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 GIT2Q14161 759 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 CNNM3Q8NE01 707 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 TMEM60Q9H2L4 133 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 IRAK3Q9Y616 596 aa28.59■■■□□ 2.17
HLA-F-227ENST00000485513 POTEMA6NI47 508 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 INO80B-WBP1J3KQ70 363 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 TSPAN1O60635 241 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 DDHD2O94830 711 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 MCM7P33993 719 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 AFF1P51825 1210 aaKnown RBP28.58■■■□□ 2.17
HLA-F-227ENST00000485513 NCBP1Q09161 790 aaKnown RBP28.58■■■□□ 2.17
HLA-F-227ENST00000485513 NOTUMQ6P988 496 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 IFNLR1Q8IU57 520 aaPredicted RBP28.58■■■□□ 2.17
HLA-F-227ENST00000485513 CCDC83Q8IWF9 413 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 ASAP3Q8TDY4 903 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 PIGOQ8TEQ8 1089 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 CCDC51Q96ER9 411 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 FAM193BQ96PV7 902 aaPredicted RBP28.58■■■□□ 2.17
HLA-F-227ENST00000485513 UBN1Q9NPG3 1134 aa28.58■■■□□ 2.17
HLA-F-227ENST00000485513 ITGA4P13612 1032 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 ARL2P36404 184 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 CAPSQ13938 189 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 CES5AQ6NT32 575 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 SMG8Q8ND04 991 aaKnown RBP28.57■■■□□ 2.16
HLA-F-227ENST00000485513 CPB2Q96IY4 423 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 C8orf76Q96K31 380 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 TMEM175Q9BSA9 504 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 IPPQ9Y573 584 aa28.57■■■□□ 2.16
HLA-F-227ENST00000485513 POMCP01189 267 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 XRCC6P12956 609 aaKnown RBP eCLIP28.56■■■□□ 2.16
HLA-F-227ENST00000485513 ZXDAP98168 799 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 ITIH3Q06033 890 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 MFSD14AQ96MC6 490 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 LLPHQ9BRT6 129 aaKnown RBP28.56■■■□□ 2.16
HLA-F-227ENST00000485513 VN1R3Q9BXE9 311 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 EIF2AQ9BY44 585 aaKnown RBP28.56■■■□□ 2.16
HLA-F-227ENST00000485513 ADAM7Q9H2U9 754 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 STK39Q9UEW8 545 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 FAN1Q9Y2M0 1017 aa28.56■■■□□ 2.16
HLA-F-227ENST00000485513 A0A087WWV3 80 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 ALDH2P05091 517 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 GLRA2P23416 452 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 MBTD1Q05BQ5 628 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 TRIM67Q6ZTA4 783 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 NFKBIZQ9BYH8 718 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 CSRNP2Q9H175 543 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 POLR3FQ9H1D9 316 aaPredicted RBP28.55■■■□□ 2.16
HLA-F-227ENST00000485513 DZANK1Q9NVP4 752 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 CDH22Q9UJ99 828 aa28.55■■■□□ 2.16
HLA-F-227ENST00000485513 USO1O60763 962 aaKnown RBP28.54■■■□□ 2.16
HLA-F-227ENST00000485513 SPATA31C1P0DKV0 1188 aa28.54■■■□□ 2.16
HLA-F-227ENST00000485513 AMHR2Q16671 573 aa28.54■■■□□ 2.16
HLA-F-227ENST00000485513 NECTIN4Q96NY8 510 aa28.54■■■□□ 2.16
HLA-F-227ENST00000485513 TUFT1Q9NNX1 390 aa28.54■■■□□ 2.16
HLA-F-227ENST00000485513 ZNF318Q5VUA4 2279 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 TMEM221A6NGB7 291 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 M0R296 226 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 NRP1O14786 923 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 EPCAMP16422 314 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 SP100P23497 879 aaPredicted RBP28.53■■■□□ 2.16
HLA-F-227ENST00000485513 PTPN14Q15678 1187 aa28.53■■■□□ 2.16
HLA-F-227ENST00000485513 RARS2Q5T160 578 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms