RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LXNQ9BS40 222 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 POMKQ9H5K3 350 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 KCNMB3Q9NPA1 279 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 BMP2KQ9NSY1 1161 aaPredicted RBP14.8□□□□□ -0.04
UBA3-210ENST00000485424 GJB4Q9NTQ9 266 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 FAM105AQ9NUU6 356 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 INPP5FQ9Y2H2 1132 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 ZNF292O60281 2723 aa14.8□□□□□ -0.04
UBA3-210ENST00000485424 NT5C1B-RDH14C9J2C7 533 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 CLASP2O75122 1294 aaKnown RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 ERLIN2O94905 339 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 STBD1O95210 358 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 YWHABP31946 246 aaKnown RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 NPEPPSP55786 919 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 BCAR1P56945 870 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 CYP4A11Q02928 519 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 NCBP1Q09161 790 aaKnown RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 TPRNQ4KMQ1 711 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 XKR9Q5GH70 373 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 SRGAP1Q7Z6B7 1085 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 TMEM173Q86WV6 379 aaPredicted RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 TPH2Q8IWU9 490 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 C4orf19Q8IY42 314 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 MRPL43Q8N983 215 aaKnown RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 NECAB1Q8N987 351 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 OXER1Q8TDS5 423 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 DYDC2Q96IM9 177 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 FAM193BQ96PV7 902 aaPredicted RBP14.79□□□□□ -0.04
UBA3-210ENST00000485424 MTRQ99707 1265 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 GBP3Q9H0R5 595 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 ZBP1Q9H171 429 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 ZSWIM4Q9H7M6 989 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 TSHZ2Q9NRE2 1034 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 NR2E1Q9Y466 385 aa14.79□□□□□ -0.04
UBA3-210ENST00000485424 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 ASAP2O43150 1006 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 DTNBO60941 627 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 PDGFBP01127 241 aaPredicted RBP14.78□□□□□ -0.04
UBA3-210ENST00000485424 NEK4P51957 841 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 FOSBP53539 338 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 CTTNQ14247 550 aaKnown RBP14.78□□□□□ -0.04
UBA3-210ENST00000485424 EMC2Q15006 297 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 CALCRLQ16602 461 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 CES5AQ6NT32 575 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 ZBTB33Q86T24 672 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 LPPQ93052 612 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 GTF3C6Q969F1 213 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 NECTIN4Q96NY8 510 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 ADAM7Q9H2U9 754 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 PCDHA12Q9UN75 941 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 PTPRZ1P23471 2315 aaPredicted RBP14.78□□□□□ -0.04
UBA3-210ENST00000485424 DCHS1Q96JQ0 3298 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 DMXL1Q9Y485 3027 aa14.78□□□□□ -0.04
UBA3-210ENST00000485424 CITO14578 2027 aa14.77□□□□□ -0.04
UBA3-210ENST00000485424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.77□□□□□ -0.05
UBA3-210ENST00000485424 MEIS3P2A8K0S8 358 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 C2CD4DB7Z1M9 353 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 CTDNEP1O95476 244 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 ITIH3Q06033 890 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 NR5A1Q13285 461 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 GIT2Q14161 759 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 TFDP1Q14186 410 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 NOMO2Q5JPE7 1267 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 RNF149Q8NC42 400 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 AUTS2Q8WXX7 1259 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 HAS1Q92839 578 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 DHX33Q9H6R0 707 aaKnown RBP14.77□□□□□ -0.05
UBA3-210ENST00000485424 AGPAT5Q9NUQ2 364 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 FAM86C1Q9NVL1 165 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 RGL1Q9NZL6 768 aa14.77□□□□□ -0.05
UBA3-210ENST00000485424 PDCD11Q14690 1871 aaKnown RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 PATJQ8NI35 1801 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 POTEMA6NI47 508 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 NEMFO60524 1076 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 BRD1O95696 1058 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 CXCL14O95715 111 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 WEE2P0C1S8 567 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 AVPR2P30518 371 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 LAMTOR4Q0VGL1 99 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 MTMR3Q13615 1198 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 MXD4Q14582 209 aaPredicted RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 SAFBQ15424 915 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBA3-210ENST00000485424 ME3Q16798 604 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 RARS2Q5T160 578 aaKnown RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 VPS52Q8N1B4 723 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 BCL7CQ8WUZ0 217 aaPredicted RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 PRPF31Q8WWY3 499 aaKnown RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 TTC12Q9H892 705 aaPredicted RBP14.76□□□□□ -0.05
UBA3-210ENST00000485424 RSAD1Q9HA92 442 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 IFT122Q9HBG6 1241 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 TBC1D13Q9NVG8 400 aa14.76□□□□□ -0.05
UBA3-210ENST00000485424 KANSL3Q9P2N6 904 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms