RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 HLA-CQ95604 372 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 MRPL38Q96DV4 380 aaKnown RBP11.86□□□□□ -0.51
DDX56-212ENST00000485367 ADAMTS10Q9H324 1103 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 C1orf112Q9NSG2 853 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 COG5Q9UP83 839 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
DDX56-212ENST00000485367 NCOR1O75376 2440 aa11.86□□□□□ -0.51
DDX56-212ENST00000485367 VCANP13611 3396 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 RB1P06400 928 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 QARSP47897 775 aaKnown RBP11.85□□□□□ -0.51
DDX56-212ENST00000485367 PSEN1P49768 467 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 DNM2P50570 870 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 GUCY1B3Q02153 619 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 DRP2Q13474 957 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 ZRSR1Q15695 479 aaKnown RBP11.85□□□□□ -0.51
DDX56-212ENST00000485367 ERCC6LQ2NKX8 1250 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 NCAPH2Q6IBW4 605 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
DDX56-212ENST00000485367 SLC24A5Q71RS6 500 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 ANO5Q75V66 913 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
DDX56-212ENST00000485367 ADAMTS19Q8TE59 1207 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 UBXN4Q92575 508 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
DDX56-212ENST00000485367 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX56-212ENST00000485367 P4HBP07237 508 aaKnown RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 LINC00271P0C7V0 271 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 EIF4BP23588 611 aaKnown RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 GPC3P51654 580 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 KCNQ1P51787 676 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 EPHA7Q15375 998 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX56-212ENST00000485367 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 AOPEPQ8N6M6 819 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 KIAA1671Q9BY89 1806 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 GOLGA6L9A6NEM1 432 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 C9IYK1 514 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 GRM6O15303 877 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX56-212ENST00000485367 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
DDX56-212ENST00000485367 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 NPEPPSP55786 919 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 DSC3Q14574 896 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 CALCRLQ16602 461 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 TIGD5Q53EQ6 642 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 ADALQ6DHV7 355 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 SYT10Q6XYQ8 523 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 LXNQ9BS40 222 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 GOLPH3LQ9H4A5 285 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 CYP26B1Q9NR63 512 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 RGL1Q9NZL6 768 aa11.84□□□□□ -0.51
DDX56-212ENST00000485367 IGKV6-21A0A0C4DH24 114 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 IKBKBO14920 756 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 CSDE1O75534 798 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 CSPG5O95196 566 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 BMP1P13497 986 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 FGFR4P22455 802 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 HNRNPH2P55795 449 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 CYP4A11Q02928 519 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 RHPN2Q8IUC4 686 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 FMR1NBQ8N0W7 255 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 MNS1Q8NEH6 495 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 UHRF1Q96T88 793 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 JPH2Q9BR39 696 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 PLVAPQ9BX97 442 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 GCOM2Q9BZD3 368 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 ALG13Q9NP73 1137 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 CWC15Q9P013 229 aaKnown RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 WRAP73Q9P2S5 460 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
DDX56-212ENST00000485367 FNDC1Q4ZHG4 1894 aaPredicted RBP11.83□□□□□ -0.52
DDX56-212ENST00000485367 BDP1A6H8Y1 2624 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms