RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 PDILTQ8N807 584 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CPB2Q96IY4 423 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PRIMPOLQ96LW4 560 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 POLD4Q9HCU8 107 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LARSQ9P2J5 1176 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ODF2LQ9ULJ1 636 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
CDK5RAP2-217ENST00000484546 A0A0U1RQF3 1178 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 H0YCG3 227 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 K7ERI5 159 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FGFR1P11362 822 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PLS3P13797 630 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 IGFBP4P22692 258 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CTNNB1P35222 781 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 GATMP50440 423 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MYCT1Q8N699 235 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 GDPD5Q8WTR4 605 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PANK2Q9BZ23 570 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LRRC27Q9C0I9 530 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 AAASQ9NRG9 546 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP2-217ENST00000484546 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 N4BP3O15049 544 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SLC16A4O15374 487 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LINC00271P0C7V0 271 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 NPTX2P47972 431 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FAM189BP81408 668 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LONRF3Q496Y0 759 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TPRNQ4KMQ1 711 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LRRC43Q8N309 656 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 URGCPQ8TCY9 931 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 DHX58Q96C10 678 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 REEP2Q9BRK0 252 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TMEM117Q9H0C3 514 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PARVGQ9HBI0 331 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 GOLGA6L4A6NEF3 574 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 K7ENM7 598 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ACKR2O00590 384 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 B4GALT5O43286 388 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LPXNO60711 386 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 NPTXRO95502 500 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ITGA4P13612 1032 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ABCD1P33897 745 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 AMPD3Q01432 767 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SLC27A1Q6PCB7 646 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 DYMQ7RTS9 669 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MICALL1Q8N3F8 863 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RSPH1Q8WYR4 309 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 BICD1Q96G01 975 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 APOL6Q9BWW8 343 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 FZD8Q9H461 694 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 UBN1Q9NPG3 1134 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 MRPL42Q9Y6G3 142 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 COL6A3P12111 3177 aa12.91□□□□□ -0.34
CDK5RAP2-217ENST00000484546 IDEP14735 1019 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 LAG3P18627 525 aa12.9□□□□□ -0.34
CDK5RAP2-217ENST00000484546 SCP2P22307 547 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms