RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KIFC3Q9BVG8 833 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 MRPL9Q9BYD2 267 aaKnown RBP13.6□□□□□ -0.23
MSH5-216ENST00000484309 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 CLDND1Q9NY35 253 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 USP20Q9Y2K6 914 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 HES2Q9Y543 173 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
MSH5-216ENST00000484309 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 LINC01565O15544 149 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 B4GALT3O60512 393 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 ZNF623O75123 536 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 OFD1O75665 1012 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 NPTXRO95502 500 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 EYA4O95677 639 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
MSH5-216ENST00000484309 AFF1P51825 1210 aaKnown RBP13.59□□□□□ -0.23
MSH5-216ENST00000484309 ERVFC1P60507 584 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 GRIN1Q05586 938 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
MSH5-216ENST00000484309 POU5F1BQ06416 359 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RESTQ13127 1097 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 NOMO2Q5JPE7 1267 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 PLPP4Q5VZY2 271 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RBM23Q86U06 439 aaKnown RBP13.59□□□□□ -0.23
MSH5-216ENST00000484309 ZBTB8OSQ8IWT0 167 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 SYMPKQ92797 1274 aaKnown RBP13.59□□□□□ -0.23
MSH5-216ENST00000484309 PGBD4Q96DM1 585 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RUSC1Q9BVN2 902 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 CSRNP2Q9H175 543 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 TLR9Q9NR96 1032 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 IPPQ9Y573 584 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 CITO14578 2027 aa13.59□□□□□ -0.23
MSH5-216ENST00000484309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 POMCP01189 267 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 EDN1P05305 212 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 BMP1P13497 986 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 ITGA4P13612 1032 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 AXLP30530 894 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 NRIP1P48552 1158 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 BCAR1P56945 870 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 NCBP1Q09161 790 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 CLUL1Q15846 466 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 ARL6IP4Q66PJ3 421 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 CABP7Q86V35 215 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 TMEM173Q86WV6 379 aaPredicted RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 ZNF280BQ86YH2 543 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 DEPTORQ8TB45 409 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 PABPC5Q96DU9 382 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 CDK5RAP3Q96JB5 506 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 NRDE2Q9H7Z3 1164 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 PRMT7Q9NVM4 692 aaPredicted RBP13.58□□□□□ -0.24
MSH5-216ENST00000484309 DNAJB4Q9UDY4 337 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 VCANP13611 3396 aa13.58□□□□□ -0.24
MSH5-216ENST00000484309 PER2O15055 1255 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 HIP1RO75146 1068 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 PRKCBP05771 671 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 CA8P35219 290 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 PPM1AP35813 382 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 MLH1P40692 756 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 NAMPTP43490 491 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 UBE3AQ05086 875 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 DLX2Q07687 328 aaPredicted RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■□ 19.3
MSH5-216ENST00000484309 RINT1Q6NUQ1 792 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 IFT74Q96LB3 600 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 UHRF1Q96T88 793 aaPredicted RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 GAD1Q99259 594 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 ENTPD7Q9NQZ7 604 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
MSH5-216ENST00000484309 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
MSH5-216ENST00000484309 CCDC169A6NNP5 214 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 SFI1A8K8P3 1242 aa13.56□□□□□ -0.24
MSH5-216ENST00000484309 TBX10O75333 385 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms