RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 SWI5Q1ZZU3 235 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 FAM126BQ8IXS8 530 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 GLG1Q92896 1179 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 RIT2Q99578 217 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 C16orf70Q9BSU1 422 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-207ENST00000483969 DDX25Q9UHL0 483 aaKnown RBP10.06□□□□□ -0.8
COL8A1-207ENST00000483969 LRFN2Q9ULH4 789 aa10.06□□□□□ -0.8
COL8A1-207ENST00000483969 H3BQV1 296 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 DLL1O00548 723 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 MSH4O15457 936 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
COL8A1-207ENST00000483969 EDIL3O43854 480 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ATG7O95352 703 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 GHRHP01286 108 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ZNF286BP0CG31 522 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 GJB2P29033 226 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 STAT5BP51692 787 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ACTR2P61160 394 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-207ENST00000483969 CUL4AQ13619 759 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-207ENST00000483969 MIS18BP1Q6P0N0 1132 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 HFE2Q6ZVN8 426 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 PLPPR4Q7Z2D5 763 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
COL8A1-207ENST00000483969 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 SNX21Q969T3 373 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 TEKT3Q9BXF9 490 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 TRPV6Q9H1D0 765 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 ERAP1Q9NZ08 941 aa10.05□□□□□ -0.8
COL8A1-207ENST00000483969 RBBP6Q7Z6E9 1792 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 ZNFX1Q9P2E3 1918 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 DDX39AO00148 427 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TBX3O15119 743 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 B4GALT4O60513 344 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 GAS7O60861 476 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TDP2O95551 362 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TIMP1P01033 207 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 SFNP31947 248 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 BMP8BP34820 402 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 SLC26A2P50443 739 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 PTGISQ16647 500 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 LRCH2Q5VUJ6 765 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 FAM160B1Q5W0V3 765 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 LARP1BQ659C4 914 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 SLC5A5Q92911 643 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 LENG9Q96B70 501 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 HDAC6Q9UBN7 1215 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 GTF2IRD1Q9UHL9 959 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 NOL7Q9UMY1 257 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
COL8A1-207ENST00000483969 USP20Q9Y2K6 914 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
COL8A1-207ENST00000483969 RRN3P2A6NIE6 340 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 WDR64B1ANS9 1081 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 SMIM10L2AP0DMW4 78 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 SMIM10L2BP0DMW5 78 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 PDCP20941 246 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 RFX1P22670 979 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 JAK3P52333 1124 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 BFSP2Q13515 415 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
COL8A1-207ENST00000483969 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
COL8A1-207ENST00000483969 SWSAP1Q6NVH7 229 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 BADQ92934 168 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 GDF15Q99988 308 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 KRTAP9-2Q9BYQ4 174 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 HIPK3Q9H422 1215 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 RNPEPQ9H4A4 650 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 AKTIPQ9H8T0 292 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 TRMT13Q9NUP7 481 aaKnown RBP10.03□□□□□ -0.8
COL8A1-207ENST00000483969 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 RNF112Q9ULX5 631 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms