RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 OR8K1Q8NGG5 319 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PIGOQ8TEQ8 1089 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 SPIRE2Q8WWL2 714 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CNOT6LQ96LI5 555 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 DRC1Q96MC2 740 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 DNAJC7Q99615 494 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MKNK1Q9BUB5 465 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NOC4LQ9BVI4 516 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 RUSC1Q9BVN2 902 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NUCKS1Q9H1E3 243 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 NDST4Q9H3R1 872 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 TMEM206Q9H813 350 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 MRPL44Q9H9J2 332 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 JPH1Q9HDC5 661 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 TYW1Q9NV66 732 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 WRAP73Q9P2S5 460 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 SLC9A2Q9UBY0 812 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PRKAG3Q9UGI9 489 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 LUC7L2Q9Y383 392 aaKnown RBP5.95□□□□□ -1.46
COL17A1-206ENST00000483876 SAMM50Q9Y512 469 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 PCDHA11Q9Y5I1 949 aa5.95□□□□□ -1.46
COL17A1-206ENST00000483876 CHD7Q9P2D1 2997 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 DMDP11532 3685 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MAST4O15021 2626 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 NPHP3-ACAD11A0A0J9YXS1 232 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 GTPBP10A4D1E9 387 aaKnown RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ASB14A6NK59 587 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 H0YCG3 227 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ZBTB39O15060 712 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MAPK13O15264 365 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 CHMP2AO43633 222 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MFAP3LO75121 409 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 PPP1R37O75864 691 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 DGAT1O75907 488 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 STBD1O95210 358 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 GYPCP04921 128 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 PLS3P13797 630 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ERCC3P19447 782 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 AVPR2P30518 371 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 HOXD13P35453 343 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ALDH5A1P51649 535 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 SMTNP53814 917 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ADKP55263 362 aaKnown RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 CCNA1P78396 465 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ZBED6P86452 979 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 GTF2BQ00403 316 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ENPEPQ07075 957 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 FAAP100Q0VG06 881 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MAPK7Q13164 816 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 PTPN14Q15678 1187 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 Q3C1V9 767 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 XKR3Q5GH77 459 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ODR4Q5SWX8 454 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MIS18BP1Q6P0N0 1132 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 CYP26C1Q6V0L0 522 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 NCAPG2Q86XI2 1143 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 SFR1Q86XK3 245 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 LURAP1LQ8IV03 231 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 TRIM59Q8IWR1 403 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 C12orf56Q8IXR9 622 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 KIAA2013Q8IYS2 634 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 TMEM199Q8N511 208 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 BANK1Q8NDB2 785 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MCPH1Q8NEM0 835 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 GPRC5AQ8NFJ5 357 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 ARNTL2Q8WYA1 636 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 SYN2Q92777 582 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 KIFAP3Q92845 792 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 HPS3Q969F9 1004 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 HVCN1Q96D96 273 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 FIZ1Q96SL8 496 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 APBA2Q99767 749 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 NIFKQ9BYG3 293 aaKnown RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 DMAC2Q9NW81 257 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 DLL3Q9NYJ7 618 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 TAB2Q9NYJ8 693 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MORF4L1Q9UBU8 362 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 PLAGL2Q9UPG8 496 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 FAM50BQ9Y247 325 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 DAAM1Q9Y4D1 1078 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 MAFBQ9Y5Q3 323 aaPredicted RBP5.94□□□□□ -1.46
COL17A1-206ENST00000483876 USP24Q9UPU5 2620 aa5.94□□□□□ -1.46
COL17A1-206ENST00000483876 LOC285556D6RIA3 1793 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PRRC2BQ5JSZ5 2229 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 TTC26A0AVF1 554 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 DCDC2CA8MYV0 355 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PMM2O15305 246 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 TGFB1I1O43294 461 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 GALR2O43603 387 aaPredicted RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 COBLO75128 1261 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 HIP1RO75146 1068 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 PRPF6O94906 941 aaKnown RBP5.93□□□□□ -1.46
COL17A1-206ENST00000483876 FGBP02675 491 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 CA3P07451 260 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 SUPT20HL2P0C7V6 817 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 NR2F2P24468 414 aa5.93□□□□□ -1.46
COL17A1-206ENST00000483876 KRT9P35527 623 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms