RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PLEKHO2Q8TD55 490 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 ERGIC2Q96RQ1 377 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 TARS2Q9BW92 718 aaKnown RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 MINDY3Q9H8M7 445 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-226ENST00000483656 SIK3Q9Y2K2 1263 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 PHLPP2Q6ZVD8 1323 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 NRCAMQ92823 1304 aa11.05□□□□□ -0.64
HDAC6-226ENST00000483656 EVPLQ92817 2033 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA8IPA6NC78 632 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 GOLGA8JA6NMD2 632 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 PES1O00541 588 aaKnown RBP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 EXOC3O60645 756 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 VTNP04004 478 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 GYPCP04921 128 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 ADRB2P07550 413 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 TPM2P07951 284 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 GARTP22102 1010 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 FXR1P51114 621 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 EFNA5P52803 228 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 PRMT2P55345 433 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 GSDMDP57764 484 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 MBTD1Q05BQ5 628 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 POU5F1BQ06416 359 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 RBL2Q08999 1139 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 KCNH2Q12809 1159 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 DPY19L2P1Q6NXN4 242 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 RUFY4Q6ZNE9 571 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 LRRC8AQ8IWT6 810 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 XXYLT1Q8NBI6 393 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 ZBTB45Q96K62 511 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 FBXL18Q96ME1 805 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 FZD8Q9H461 694 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 IFT122Q9HBG6 1241 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 XPNPEP3Q9NQH7 507 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC6-226ENST00000483656 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
HDAC6-226ENST00000483656 A0A087WZ62 844 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ABLIM1O14639 778 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 MAPK13O15264 365 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 TREHO43280 583 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 AFPP02771 609 aaKnown RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 INHAP05111 366 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 PRKCBP05771 671 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 TMOD1P28289 359 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 GPC3P51654 580 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 CCZ1BP86790 482 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 CCZ1P86791 482 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 STRN3Q13033 797 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 TFDP1Q14186 410 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 AMHR2Q16671 573 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 FKBP15Q5T1M5 1219 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 CBWD2Q8IUF1 395 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ZBTB8OSQ8IWT0 167 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 SLAIN1Q8ND83 568 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 SAAL1Q96ER3 474 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 BICD1Q96G01 975 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ABHD8Q96I13 439 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ACO2Q99798 780 aaKnown RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 FDXACB1Q9BRP7 624 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-226ENST00000483656 KATNAL1Q9BW62 490 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 NFKBIZQ9BYH8 718 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 TTYH3Q9C0H2 523 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 C2orf40Q9H1Z8 148 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ADAMTS10Q9H324 1103 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 WBP1LQ9NX94 342 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 AKT3Q9Y243 479 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 FRMD4BQ9Y2L6 1034 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 ZKSCAN5Q9Y2L8 839 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
HDAC6-226ENST00000483656 HTTP42858 3142 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 A0A0B4J269 797 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 ACKR2O00590 384 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 EPHB6O15197 1021 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 B4GALT5O43286 388 aa11.02□□□□□ -0.65
HDAC6-226ENST00000483656 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms