RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ERMP1Q7Z2K6 904 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 ZNF410Q86VK4 478 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 SKAP1Q86WV1 359 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC105Q8IYK2 499 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 RDM1Q8NG50 284 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 URGCPQ8TCY9 931 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 TBCKQ8TEA7 893 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 RSAD2Q8WXG1 361 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 PGBD4Q96DM1 585 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 NLRP4Q96MN2 994 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 FAM193BQ96PV7 902 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-206ENST00000483030 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 MRPL17Q9NRX2 175 aaKnown RBP8.29□□□□□ -1.08
CSDE1-206ENST00000483030 VPS54Q9P1Q0 977 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 DUSP12Q9UNI6 340 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 FAN1Q9Y2M0 1017 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC195A0A1B0GUA6 201 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 NRP1O14786 923 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 N4BP1O75113 896 aaKnown RBP8.28□□□□□ -1.08
CSDE1-206ENST00000483030 POMCP01189 267 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 CFHP08603 1231 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 SRGAP2CP0DJJ0 459 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 AK2P54819 239 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 NPEPPSP55786 919 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 NLRP5P59047 1200 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 NTRK3Q16288 839 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 Q4G0T1 1027 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 PLA2G4FQ68DD2 849 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 B3GNT9Q6UX72 402 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 C15orf39Q6ZRI6 1047 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 ANO5Q75V66 913 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 TAS1R1Q7RTX1 841 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 KCNG4Q8TDN1 519 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 JAKMIP1Q96N16 626 aaKnown RBP8.28□□□□□ -1.08
CSDE1-206ENST00000483030 RSAD1Q9HA92 442 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 IFT122Q9HBG6 1241 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 MAN1C1Q9NR34 630 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 WNT16Q9UBV4 365 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 STK39Q9UEW8 545 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 PRG3Q9Y2Y8 225 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-206ENST00000483030 EVPLQ92817 2033 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 MYO10Q9HD67 2058 aa8.28□□□□□ -1.08
CSDE1-206ENST00000483030 SPTBN4Q9H254 2564 aa8.27□□□□□ -1.08
CSDE1-206ENST00000483030 CYP3A7-CYP3A51PA0A087WV96 503 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 KRBA1A5PL33 1030 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 TEX28O15482 410 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 TDP2O95551 362 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 URODP06132 367 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 SPATA31D3P0C874 917 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 IFNAR1P17181 557 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 RFX1P22670 979 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 CYP3A7P24462 503 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 HOXA11P31270 313 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 GBP2P32456 591 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 PSMC5P62195 406 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 CCT2P78371 535 aaKnown RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 BMP2KLQ5H9B9 411 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 UBXN11Q5T124 520 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 BLOC1S2Q6QNY1 142 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 SPATA31D4Q6ZUB0 917 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 SLC44A3Q8N4M1 653 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 CMASQ8NFW8 434 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 ETNPPLQ8TBG4 499 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 PRPF31Q8WWY3 499 aaKnown RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 TMEM143Q96AN5 459 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 RPS6KC1Q96S38 1066 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 MYADMQ96S97 322 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 JPH2Q9BR39 696 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 TMEM175Q9BSA9 504 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 RNF26Q9BY78 433 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 MINDY3Q9H8M7 445 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 WDR6Q9NNW5 1121 aaKnown RBP8.27□□□□□ -1.09
CSDE1-206ENST00000483030 AGPAT5Q9NUQ2 364 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 CA14Q9ULX7 337 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 PLXNA3P51805 1871 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 FAM186AA6NE01 2351 aa8.27□□□□□ -1.09
CSDE1-206ENST00000483030 EML1O00423 815 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 INPPL1O15357 1258 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 RFPL2O75678 378 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 GLUD1P00367 558 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 LMNAP02545 664 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SOD2P04179 222 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 ADH1AP07327 375 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 PDIA3P30101 505 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 OR1G1P47890 313 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 QARSP47897 775 aaKnown RBP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 NONOQ15233 471 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SPECC1Q5M775 1068 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 KIAA0319Q5VV43 1072 aa8.26□□□□□ -1.09
CSDE1-206ENST00000483030 SRGAP1Q7Z6B7 1085 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms