RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 POLR3BQ9NW08 1133 aaPredicted RBP3.41□□□□□ -1.86
GTDC1-216ENST00000482961 DIRC3C9JPN6 131 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 H3BNC9 293 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 ZSCAN20P17040 1043 aaPredicted RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 SDHAP31040 664 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 PROK1P58294 105 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 LACTBP83111 547 aaPredicted RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 SLC6A3Q01959 620 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 GUCY1A3Q02108 690 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 KRTAP27-1Q3LI81 207 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 PDCD4Q53EL6 469 aaKnown RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 AKNAD1Q5T1N1 836 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 FSTL4Q6MZW2 842 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 CISD2Q8N5K1 135 aaKnown RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 OR5M3Q8NGP4 307 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 Q96MF0 132 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 FOXB1Q99853 325 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 LSM14BQ9BX40 385 aaKnown RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 SPON1Q9HCB6 807 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 ACSS2Q9NR19 701 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 ARHGEF4Q9NR80 690 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 ASB6Q9NWX5 421 aa3.4□□□□□ -1.87
GTDC1-216ENST00000482961 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.4□□□□□ -1.87
GTDC1-216ENST00000482961 TP73O15350 636 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 SPATA31D3P0C874 917 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 FDXRP22570 491 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 CCT4P50991 539 aaKnown RBP3.39□□□□□ -1.87
GTDC1-216ENST00000482961 CATSPEREQ5SY80 951 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 YOD1Q5VVQ6 348 aaPredicted RBP3.39□□□□□ -1.87
GTDC1-216ENST00000482961 SPATA31D4Q6ZUB0 917 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 RTN4RL1Q86UN2 441 aaPredicted RBP3.39□□□□□ -1.87
GTDC1-216ENST00000482961 XYLT1Q86Y38 959 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 FOXRED1Q96CU9 486 aaPredicted RBP3.39□□□□□ -1.87
GTDC1-216ENST00000482961 SGSM3Q96HU1 749 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 NELL2Q99435 816 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 KCMF1Q9P0J7 381 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 SLC17A6Q9P2U8 582 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 LRIT1Q9P2V4 623 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 LRP12Q9Y561 859 aa3.39□□□□□ -1.87
GTDC1-216ENST00000482961 TRAV20A0A0B4J274 112 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 MTSS1O43312 755 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 NTN1O95631 604 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 MXRA7P84157 204 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 ROM1Q03395 351 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 C11orf87Q6NUJ2 197 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 Q6ZNX1 250 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 ZNF48Q96MX3 618 aaPredicted RBP3.38□□□□□ -1.87
GTDC1-216ENST00000482961 UIMC1Q96RL1 719 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 IL17RBQ9NRM6 502 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 ING3Q9NXR8 418 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 FOXJ2Q9P0K8 574 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 ARPP21Q9UBL0 812 aaPredicted RBP3.38□□□□□ -1.87
GTDC1-216ENST00000482961 B3GALT1Q9Y5Z6 326 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 ZNF521Q96K83 1311 aa3.38□□□□□ -1.87
GTDC1-216ENST00000482961 WIPF3A6NGB9 483 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 MANSC4A6NHS7 340 aaPredicted RBP3.37□□□□□ -1.87
GTDC1-216ENST00000482961 PRR5-ARHGAP8B1AHC4 643 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 B4E1Z4 1266 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 ARVCFO00192 962 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 NRP1O14786 923 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 HIP1RO75146 1068 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 FOSP01100 380 aaPredicted RBP3.37□□□□□ -1.87
GTDC1-216ENST00000482961 PRLP01236 227 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 KRT10P13645 584 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 CASRP41180 1078 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 PTF1AQ7RTS3 328 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 ZBTB8BQ8NAP8 495 aaPredicted RBP3.37□□□□□ -1.87
GTDC1-216ENST00000482961 DLG3Q92796 817 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 ENKD1Q9H0I2 346 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 PCDHA9Q9Y5H5 950 aa3.37□□□□□ -1.87
GTDC1-216ENST00000482961 IQCA1LA6NCM1 817 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 ERVV-2B6SEH9 535 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 PRR23D1E9PI22 279 aaPredicted RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 CDKL5O76039 1030 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 PRR23D2P0DMB1 279 aaPredicted RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 HSP90B1P14625 803 aaKnown RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 FOXG1P55316 489 aaPredicted RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 MRPS35P82673 323 aaKnown RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 SLFN12LQ6IEE8 588 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 DOK3Q7L591 496 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 GPR149Q86SP6 731 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 SYT12Q8IV01 421 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 DPF1Q92782 380 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 PTPRN2Q92932 1015 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 E2F7Q96AV8 911 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 IL17RAQ96F46 866 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 VPS33BQ9H267 617 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 PRKAG3Q9UGI9 489 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 SYNPO2Q9UMS6 1093 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 CLCA2Q9UQC9 943 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 USP15Q9Y4E8 981 aaPredicted RBP3.36□□□□□ -1.87
GTDC1-216ENST00000482961 FPGT-TNNI3KV9GXZ4 949 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 ZNF804BA4D1E1 1349 aa3.36□□□□□ -1.87
GTDC1-216ENST00000482961 SCAMP3O14828 347 aaKnown RBP3.35□□□□□ -1.87
GTDC1-216ENST00000482961 SSBP05455 408 aaKnown RBP eCLIP3.35□□□□□ -1.87
GTDC1-216ENST00000482961 EXOSC10Q01780 885 aaKnown RBP3.35□□□□□ -1.87
GTDC1-216ENST00000482961 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
GTDC1-216ENST00000482961 MRPL49Q13405 166 aaKnown RBP3.35□□□□□ -1.87
GTDC1-216ENST00000482961 METTL16Q86W50 562 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms