RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
TMEM54-206ENST00000482771 STK39Q9UEW8 545 aa14.38□□□□□ -0.11
TMEM54-206ENST00000482771 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
TMEM54-206ENST00000482771 GBP2P32456 591 aaPredicted RBP14.37□□□□□ -0.11
TMEM54-206ENST00000482771 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 B3GNT9Q6UX72 402 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 ANO5Q75V66 913 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 SKAP1Q86WV1 359 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 SLC44A3Q8N4M1 653 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 PRPF31Q8WWY3 499 aaKnown RBP14.37□□□□□ -0.11
TMEM54-206ENST00000482771 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
TMEM54-206ENST00000482771 TMEM175Q9BSA9 504 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 RSAD1Q9HA92 442 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 WNT16Q9UBV4 365 aa14.37□□□□□ -0.11
TMEM54-206ENST00000482771 CYP3A7-CYP3A51PA0A087WV96 503 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 KRBA1A5PL33 1030 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 TDP2O95551 362 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 CYP3A7P24462 503 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 NPEPPSP55786 919 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 PSMC5P62195 406 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 CCT2P78371 535 aaKnown RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 PLA2G4FQ68DD2 849 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 ZNF579Q8NAF0 562 aaKnown RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 CMASQ8NFW8 434 aaPredicted RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 TMEM143Q96AN5 459 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 WDR6Q9NNW5 1121 aaKnown RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 MAN1C1Q9NR34 630 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 SH3GLB2Q9NR46 395 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 SSX2IPQ9Y2D8 614 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 PRG3Q9Y2Y8 225 aaPredicted RBP14.36□□□□□ -0.11
TMEM54-206ENST00000482771 COL4A3BPQ9Y5P4 624 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 CACNA1AO00555 2505 aa14.36□□□□□ -0.11
TMEM54-206ENST00000482771 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 TEX28O15482 410 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 RFPL2O75678 378 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 SOD2P04179 222 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 URODP06132 367 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 IFNAR1P17181 557 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 RFX1P22670 979 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 OR1G1P47890 313 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 NONOQ15233 471 aaKnown RBP eCLIP14.35□□□□□ -0.11
TMEM54-206ENST00000482771 UBXN11Q5T124 520 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 SRGAP1Q7Z6B7 1085 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 STAMQ92783 540 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 MYADMQ96S97 322 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 SLKQ9H2G2 1235 aaPredicted RBP14.35□□□□□ -0.11
TMEM54-206ENST00000482771 NCOA5Q9HCD5 579 aaKnown RBP14.35□□□□□ -0.11
TMEM54-206ENST00000482771 CA14Q9ULX7 337 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 PCDHA4Q9UN74 947 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 CNTNAP2Q9UHC6 1331 aa14.35□□□□□ -0.11
TMEM54-206ENST00000482771 EML1O00423 815 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 INPPL1O15357 1258 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 GAS2O43903 313 aaKnown RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 GLUD1P00367 558 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 LMNAP02545 664 aaKnown RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 ADH1AP07327 375 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 ITGA4P13612 1032 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 SPECC1Q5M775 1068 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 KIAA0319Q5VV43 1072 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 PALB2Q86YC2 1186 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 COLGALT2Q8IYK4 626 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 ETNPPLQ8TBG4 499 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 SLC7A3Q8WY07 619 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 RIN2Q8WYP3 895 aaPredicted RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 SMG7Q92540 1137 aaKnown RBP14.34□□□□□ -0.11
TMEM54-206ENST00000482771 KCNB2Q92953 911 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 SEMA4AQ9H3S1 761 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 EPS15L1Q9UBC2 864 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 R4GN57 208 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 DCHS1Q96JQ0 3298 aa14.34□□□□□ -0.11
TMEM54-206ENST00000482771 NCLP19338 710 aaKnown RBP14.33□□□□□ -0.12
TMEM54-206ENST00000482771 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 SMG8Q8ND04 991 aaKnown RBP14.33□□□□□ -0.12
TMEM54-206ENST00000482771 ST13P5Q8NFI4 369 aaPredicted RBP14.33□□□□□ -0.12
TMEM54-206ENST00000482771 PSPC1Q8WXF1 523 aaKnown RBP14.33□□□□□ -0.12
TMEM54-206ENST00000482771 NXPE3Q969Y0 559 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 MBOAT7Q96N66 472 aa14.33□□□□□ -0.12
TMEM54-206ENST00000482771 GAD1Q99259 594 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms