RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TMEM117Q9H0C3 514 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 CCDC113Q9H0I3 377 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 CUEDC2Q9H467 287 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 TMEM134Q9H6X4 195 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
HMGN1-214ENST00000482733 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 CNTNAP2Q9UHC6 1331 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 A0A1B0GUA9 196 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 TBKBP1A7MCY6 615 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 H0YCG3 227 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 K7ERI5 159 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
HMGN1-214ENST00000482733 FAM13AO94988 1023 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 ARF4P18085 180 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-214ENST00000482733 PRPF4BQ13523 1007 aaKnown RBP18.29■□□□□ 0.52
HMGN1-214ENST00000482733 GIT2Q14161 759 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 IQUBQ8NA54 791 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 RNF169Q8NCN4 708 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 ARNTL2Q8WYA1 636 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 GAS2L1Q99501 681 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-214ENST00000482733 REEP2Q9BRK0 252 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 KIFC3Q9BVG8 833 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 LRRC27Q9C0I9 530 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 PRDM12Q9H4Q4 367 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 ARHGAP28Q9P2N2 729 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 CIZ1Q9ULV3 898 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-214ENST00000482733 CHD9Q3L8U1 2897 aa18.29■□□□□ 0.52
HMGN1-214ENST00000482733 MYH15Q9Y2K3 1946 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 NPHP3-ACAD11A0A0J9YXS1 232 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 SFI1A8K8P3 1242 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 N4BP3O15049 544 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 FGFR1P11362 822 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-214ENST00000482733 ZNF131P52739 623 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 TMEM132AQ24JP5 1023 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 UBXN11Q5T124 520 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 RESP18Q5W5W9 173 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
HMGN1-214ENST00000482733 TMEM192Q8IY95 271 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 HACE1Q8IYU2 909 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 PDILTQ8N807 584 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
HMGN1-214ENST00000482733 CPB2Q96IY4 423 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 TRIM6Q9C030 488 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-214ENST00000482733 CERS4Q9HA82 394 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 PARVGQ9HBI0 331 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 UBN1Q9NPG3 1134 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 STXBP5LQ9Y2K9 1186 aa18.28■□□□□ 0.52
HMGN1-214ENST00000482733 A0A087X0B3 334 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 B4GALT5O43286 388 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 RB1P06400 928 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 LIG1P18858 919 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 ABCD1P33897 745 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 GATMP50440 423 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-214ENST00000482733 PAN2Q504Q3 1202 aaKnown RBP18.27■□□□□ 0.52
HMGN1-214ENST00000482733 APBB1IPQ7Z5R6 666 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-214ENST00000482733 MYCT1Q8N699 235 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 SLC17A8Q8NDX2 589 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 MYLIPQ8WY64 445 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 KCNN1Q92952 543 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 CASD1Q96PB1 797 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 C17orf80Q9BSJ5 609 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 MRPL9Q9BYD2 267 aaKnown RBP18.27■□□□□ 0.52
HMGN1-214ENST00000482733 MAGEF1Q9HAY2 307 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 RNF19AQ9NV58 838 aa18.27■□□□□ 0.52
HMGN1-214ENST00000482733 SLC16A4O15374 487 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 FOSL2P15408 326 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 CMA1P23946 247 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 BMPR1AP36894 532 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 AMPD3Q01432 767 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 STRN3Q13033 797 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 E2F4Q16254 413 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 EPC2Q52LR7 807 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 GLB1LQ6UWU2 654 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 LRRC43Q8N309 656 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 TMEM161BQ8NDZ6 487 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 FBXO22Q8NEZ5 403 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 DDX12PQ92771 950 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 ADPGKQ9BRR6 497 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 PLVAPQ9BX97 442 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
HMGN1-214ENST00000482733 TNMDQ9H2S6 317 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 MTUS1Q9ULD2 1270 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 MRPL42Q9Y6G3 142 aaKnown RBP18.26■□□□□ 0.51
HMGN1-214ENST00000482733 GBF1Q92538 1859 aa18.26■□□□□ 0.51
HMGN1-214ENST00000482733 C5orf67F2Z3F1 127 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 LINC00271P0C7V0 271 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 ITGA4P13612 1032 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 CTNNB1P35222 781 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 NCKAP1LP55160 1127 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 CLLU1OSQ5K130 101 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 HELQQ8TDG4 1101 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 DHX58Q96C10 678 aa18.25■□□□□ 0.51
HMGN1-214ENST00000482733 EIF2AQ9BY44 585 aaKnown RBP18.25■□□□□ 0.51
HMGN1-214ENST00000482733 ZHX3Q9H4I2 956 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms