RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 SLC22A17Q8WUG5 538 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 SLC7A3Q8WY07 619 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 FAM20AQ96MK3 541 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
NUP58-212ENST00000481980 AGPAT5Q9NUQ2 364 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 DNAJB4Q9UDY4 337 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 VAV3Q9UKW4 847 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 KCNJ14Q9UNX9 436 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 PCDHB2Q9Y5E7 798 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 COL4A3BPQ9Y5P4 624 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 KMT2EQ8IZD2 1858 aa18.73■□□□□ 0.59
NUP58-212ENST00000481980 PDGFBP01127 241 aaPredicted RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 WEE2P0C1S8 567 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 SLC11A1P49279 550 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 HMGN5P82970 282 aaKnown RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 KIAA1841Q6NSI8 718 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 MRPL10Q7Z7H8 261 aaKnown RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 ZNF280BQ86YH2 543 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 EXOC8Q8IYI6 725 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 NECAB1Q8N987 351 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 FAM184AQ8NB25 1140 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 PRPF31Q8WWY3 499 aaKnown RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 LLPHQ9BRT6 129 aaKnown RBP18.72■□□□□ 0.59
NUP58-212ENST00000481980 GBP3Q9H0R5 595 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 IRF2BPLQ9H1B7 796 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 KCNMB3Q9NPA1 279 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 PPME1Q9Y570 386 aa18.72■□□□□ 0.59
NUP58-212ENST00000481980 BRD1O95696 1058 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 P4HBP07237 508 aaKnown RBP18.71■□□□□ 0.59
NUP58-212ENST00000481980 NUBP1P53384 320 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 SCRN1Q12765 414 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 PPP4R3AQ6IN85 833 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 AGMOQ6ZNB7 445 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 PPFIBP1Q86W92 1011 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 ZDHHC14Q8IZN3 488 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 WASF1Q92558 559 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 INTS4Q96HW7 963 aaKnown RBP18.71■□□□□ 0.59
NUP58-212ENST00000481980 CEP170P1Q96L14 293 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 PHF20Q9BVI0 1012 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 DHX33Q9H6R0 707 aaKnown RBP18.71■□□□□ 0.59
NUP58-212ENST00000481980 STK39Q9UEW8 545 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 USTQ9Y2C2 406 aa18.71■□□□□ 0.59
NUP58-212ENST00000481980 CCDC194A0A1B0GVG4 234 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 B4GALT3O60512 393 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 LARGE1O95461 756 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 SRGAP2CP0DJJ0 459 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 GCFC2P16383 781 aaKnown RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 RFC5P40937 340 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 LAMTOR4Q0VGL1 99 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 NEK8Q86SG6 692 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 CABP7Q86V35 215 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 TDRD5Q8NAT2 981 aaKnown RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 MINDY3Q9H8M7 445 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 WRAP73Q9P2S5 460 aaPredicted RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 LIMD1Q9UGP4 676 aa18.7■□□□□ 0.58
NUP58-212ENST00000481980 DBR1Q9UK59 544 aaKnown RBP18.7■□□□□ 0.58
NUP58-212ENST00000481980 VPS13AQ96RL7 3174 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 DDHD2O94830 711 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 ALDH2P05091 517 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 AFF1P51825 1210 aaKnown RBP18.69■□□□□ 0.58
NUP58-212ENST00000481980 EPHA7Q15375 998 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 TMC5Q6UXY8 1006 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 C4orf19Q8IY42 314 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 PLCD3Q8N3E9 789 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 HAS1Q92839 578 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 RSAD1Q9HA92 442 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 FAM86C1Q9NVL1 165 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 CNTNAP2Q9UHC6 1331 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 MYO10Q9HD67 2058 aa18.69■□□□□ 0.58
NUP58-212ENST00000481980 TBX3O15119 743 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 ASAP2O43150 1006 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 CCNT1O60563 726 aaKnown RBP18.68■□□□□ 0.58
NUP58-212ENST00000481980 ASGR2P07307 311 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 XBP1P17861 261 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 CUL4AQ13619 759 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 OTUD6AQ7L8S5 288 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
NUP58-212ENST00000481980 TCP11Q8WWU5 503 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 ATOH1Q92858 354 aaPredicted RBP18.68■□□□□ 0.58
NUP58-212ENST00000481980 KLHL5Q96PQ7 755 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 NAP1L4Q99733 375 aaKnown RBP18.68■□□□□ 0.58
NUP58-212ENST00000481980 LXNQ9BS40 222 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 TMEM175Q9BSA9 504 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 EMILIN2Q9BXX0 1053 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 SMOC2Q9H3U7 446 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 SFXN1Q9H9B4 322 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
NUP58-212ENST00000481980 FAN1Q9Y2M0 1017 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms