RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CLCN3P51790 818 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
HLA-B-253ENST00000481849 CAMK1Q14012 370 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 FAM102BQ5T8I3 360 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
HLA-B-253ENST00000481849 ADGRD2Q7Z7M1 963 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 RBM23Q86U06 439 aaKnown RBP10.17□□□□□ -0.78
HLA-B-253ENST00000481849 PRSS33Q8NF86 280 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 GJA10Q969M2 543 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 PLVAPQ9BX97 442 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 TBC1D22BQ9NU19 505 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 GPSM3Q9Y4H4 160 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 PCDHA10Q9Y5I2 948 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 COL4A6Q14031 1691 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
HLA-B-253ENST00000481849 SIP14410 1827 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 COL1A2P08123 1366 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 MICAL3Q7RTP6 2002 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 KDM3AQ9Y4C1 1321 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 MSH4O15457 936 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 TBX10O75333 385 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 FGFR1P11362 822 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 PSMA5P28066 241 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 PDIA3P30101 505 aaKnown RBP10.16□□□□□ -0.78
HLA-B-253ENST00000481849 NRIP1P48552 1158 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 SARSP49591 514 aaKnown RBP10.16□□□□□ -0.78
HLA-B-253ENST00000481849 NDUFV1P49821 464 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 NLRP5P59047 1200 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 PTSQ03393 145 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 NTRK3Q16288 839 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 MCTP2Q6DN12 878 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
HLA-B-253ENST00000481849 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 CCDC148Q8NFR7 591 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 ADAM32Q8TC27 787 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 SPPL3Q8TCT6 385 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 MICAL1Q8TDZ2 1067 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 POF1BQ8WVV4 589 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 LENG9Q96B70 501 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 AKT3Q9Y243 479 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 FAM50BQ9Y247 325 aa10.16□□□□□ -0.78
HLA-B-253ENST00000481849 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
HLA-B-253ENST00000481849 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 GPR182O15218 404 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 SPINT1O43278 529 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 NCK2O43639 380 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 GPR32O75388 356 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 REC8O95072 547 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 IFNAR1P17181 557 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 CRYBB1P53674 252 aaPredicted RBP10.15□□□□□ -0.78
HLA-B-253ENST00000481849 NLRP11P59045 1033 aaKnown RBP10.15□□□□□ -0.78
HLA-B-253ENST00000481849 RELBQ01201 579 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 PRKCEQ02156 737 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 ZP2Q05996 745 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 STK3Q13188 491 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 COL19A1Q14993 1142 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 UGCGQ16739 394 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
HLA-B-253ENST00000481849 EFCAB12Q6NXP0 572 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 P2RX5Q93086 422 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 SCLT1Q96NL6 688 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 MAP7D2Q96T17 732 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 RNF26Q9BY78 433 aaPredicted RBP10.15□□□□□ -0.78
HLA-B-253ENST00000481849 DISC1Q9NRI5 854 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 RGS18Q9NS28 235 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 CD207Q9UJ71 328 aa10.15□□□□□ -0.78
HLA-B-253ENST00000481849 NID2Q14112 1375 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 CEP250Q9BV73 2442 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 C9IYK1 514 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 PER2O15055 1255 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 MBTPS2O43462 519 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 EDIL3O43854 480 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 ZNF862O60290 1169 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 GAS7O60861 476 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 DTNBO60941 627 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 TDP2O95551 362 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 ALADP13716 330 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 FGFR4P22455 802 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 CIITAP33076 1130 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 RAB15P59190 212 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 RBM10P98175 930 aaKnown RBP10.14□□□□□ -0.79
HLA-B-253ENST00000481849 SSRP1Q08945 709 aaKnown RBP10.14□□□□□ -0.79
HLA-B-253ENST00000481849 ADAM15Q13444 863 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-253ENST00000481849 ODR4Q5SWX8 454 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 LRCH2Q5VUJ6 765 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 RUFY3Q7L099 469 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 ADHFE1Q8IWW8 467 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 TRIM22Q8IYM9 498 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 TBCKQ8TEA7 893 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
HLA-B-253ENST00000481849 FAM167AQ96KS9 214 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms