RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CERS4Q9HA82 394 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 GPRC5CQ9NQ84 441 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 TBC1D22BQ9NU19 505 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 TANC1Q9C0D5 1861 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 BICDL2A1A5D9 508 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 FAM227AF5H4B4 570 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 M0R082 166 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 SEPT2Q15019 361 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 CNN3Q15417 329 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 DNAJC21Q5F1R6 531 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 KCNK18Q7Z418 384 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MYLK4Q86YV6 388 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 MCATQ8IVS2 390 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 GOLGA6L1Q8N7Z2 621 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 GALNT11Q8NCW6 608 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZNF417Q8TAU3 575 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZNF587Q96SQ5 575 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 SPON1Q9HCB6 807 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZNF277Q9NRM2 450 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 PPARGC1AQ9UBK2 798 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 GPR55Q9Y2T6 319 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 NPFFR2Q9Y5X5 522 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 WASHC2AQ641Q2 1341 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 AGRPO00253 132 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 IPO5O00410 1097 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 FSCN2O14926 492 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 TMCC2O75069 709 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 HOXB4P17483 251 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 SEC24CP53992 1094 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZNF445P59923 1031 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 GSTM4Q03013 218 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 SRSF11Q05519 484 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 PRKG2Q13237 762 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MOGSQ13724 837 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 CCDC38Q502W7 563 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 KLHDC7AQ5VTJ3 777 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 SPATA1Q5VX52 437 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MBLAC2Q68D91 279 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MAMDC2Q7Z304 686 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 DEFB132Q7Z7B7 95 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZFPM1Q8IX07 1006 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 PLD6Q8N2A8 252 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 KLHL23Q8NBE8 558 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ZNF496Q96IT1 587 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 VPS33BQ9H267 617 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 RGS13O14921 159 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 VAMP4O75379 141 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 GJB3O75712 270 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ADAMTS2O95450 1211 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SRGAP2CP0DJJ0 459 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 TNFAIP2Q03169 654 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 NAT8LQ8N9F0 302 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SPATA5Q8NB90 893 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 OR1N1Q8NGS0 311 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 PRAM1Q96QH2 718 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 CNTD2Q9H8S5 307 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 BTG4Q9NY30 223 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 CLSPNQ9HAW4 1339 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 TCRBV5S4A2TA0A5A2 114 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 KCNK3O14649 394 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ADAM11O75078 769 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 DHRS4L1P0CG22 281 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SLC9A1P19634 815 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 PDCP20941 246 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 AGXTP21549 392 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 MAN2A2P49641 1150 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ALDH6A1Q02252 535 aaKnown RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 MAP4K2Q12851 820 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ADAM9Q13443 819 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ACAP2Q15057 778 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 CCDC129Q6ZRS4 1044 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 CHSY3Q70JA7 882 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
SMC6-208ENST00000481708 CHCHD4Q8N4Q1 142 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SLC30A5Q8TAD4 765 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 KLHDC7BQ96G42 594 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 ELF4Q99607 663 aaPredicted RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 AGXT2Q9BYV1 514 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SOX17Q9H6I2 414 aaPredicted RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 AKT3Q9Y243 479 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 HIF3AQ9Y2N7 669 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 FLT4P35916 1363 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 TERTO14746 1132 aaKnown RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 DDX3YO15523 660 aaKnown RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 SMARCA1P28370 1054 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 MRE11P49959 708 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 FAM193AP78312 1265 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SEC23AQ15436 765 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 CCDC92Q53HC0 331 aaPredicted RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 PTF1AQ7RTS3 328 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 AMIGO3Q86WK7 504 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 APPL2Q8NEU8 664 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 SEC62Q99442 399 aaKnown RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 DESI2Q9BSY9 194 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 GP6Q9HCN6 339 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 UBN1Q9NPG3 1134 aa3.87□□□□□ -1.79
SMC6-208ENST00000481708 GDF2Q9UK05 429 aaPredicted RBP3.87□□□□□ -1.79
SMC6-208ENST00000481708 NSFL1CQ9UNZ2 370 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms