RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 VN1R2Q8NFZ6 395 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 ZSCAN31Q96LW9 406 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 TMEM175Q9BSA9 504 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 ZBP1Q9H171 429 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 RSAD1Q9HA92 442 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 TUFT1Q9NNX1 390 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
SQSTM1-207ENST00000481335 MUC6Q6W4X9 2439 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 TECTAO75443 2155 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 HIDE1A8MVS5 230 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 INPPL1O15357 1258 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 CTSAP10619 480 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 PBX3P40426 434 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 TXKP42681 527 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 ITIH3Q06033 890 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 IGSF21Q96ID5 467 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 DZANK1Q9NVP4 752 aa13.5□□□□□ -0.25
SQSTM1-207ENST00000481335 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 GALTP07902 379 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 ARL2P36404 184 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 TECP42680 631 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 AGMOQ6ZNB7 445 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 PPFIBP1Q86W92 1011 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 MCPH1Q8NEM0 835 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 LPPQ93052 612 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 S1PR5Q9H228 398 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 DBR1Q9UK59 544 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 HCFC2Q9Y5Z7 792 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
SQSTM1-207ENST00000481335 DENND4AQ7Z401 1863 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 POTEMA6NI47 508 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 TSPAN1O60635 241 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 SEC24BO95487 1268 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 CAPSQ13938 189 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 CES5AQ6NT32 575 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 SYCE2Q6PIF2 218 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 EDAQ92838 391 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 FAM193BQ96PV7 902 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 CSRNP2Q9H175 543 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 SSX2IPQ9Y2D8 614 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
SQSTM1-207ENST00000481335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 MEIS3P2A8K0S8 358 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 WNT7AO00755 349 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 ZBTB39O15060 712 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 ALDH2P05091 517 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 OR52Z1P0C646 297 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 ITGA4P13612 1032 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 RPA1P27694 616 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 MCM7P33993 719 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 MBTD1Q05BQ5 628 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 BMP8AQ7Z5Y6 402 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 TMEM173Q86WV6 379 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 ADAM7Q9H2U9 754 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 GIT1Q9Y2X7 761 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 IPPQ9Y573 584 aa13.47□□□□□ -0.25
SQSTM1-207ENST00000481335 DTNBO60941 627 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 NR1I2O75469 434 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 CXCL14O95715 111 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 GLRA2P23416 452 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 MTHFRP42898 656 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 SLC11A1P49279 550 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms