RNA–Protein interactions for RNA: ENST00000480683.2

KCNMA1-219, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-219ENST00000480683 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 NAF1Q96HR8 494 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 TSC22D3Q99576 134 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 DCAF12L1Q5VU92 463 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 NUGGCQ68CJ6 796 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 C1orf54Q8WWF1 131 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 HEMGNQ9BXL5 484 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 TSKSQ9UJT2 592 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 PARP4Q9UKK3 1724 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 RGS16O15492 202 aaPredicted RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 AFPP02771 609 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 NR3C1P04150 777 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 PCK1P35558 622 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 GCLMP48507 274 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 SOX10P56693 466 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 MXRA7P84157 204 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 KCTD10Q9H3F6 313 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
KCNMA1-219ENST00000480683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 LAD1O00515 517 aa16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 PAPOLAP51003 745 aaKnown RBP16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 CERS5Q8N5B7 392 aa16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 GANQ9H2C0 597 aa16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 UTP11Q9Y3A2 253 aaKnown RBP16.71■□□□□ 0.26
KCNMA1-219ENST00000480683 PVALEFA0A1B0GWK0 134 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 POLE2P56282 527 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 DGKZQ13574 1117 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 GIT2Q14161 759 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 LMBRD2Q68DH5 695 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 UCMAQ8WVF2 138 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 ANO3Q9BYT9 981 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 TRIM7Q9C029 511 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 KLHL11Q9NVR0 708 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 RNF14Q9UBS8 474 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 COG5Q9UP83 839 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 SRRM3A6NNA2 597 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 FOXN3O00409 490 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 SNX3O60493 162 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 ICA1Q05084 483 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 ZCWPW2Q504Y3 356 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
KCNMA1-219ENST00000480683 SHANK3Q9BYB0 1731 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 A6NHS1 94 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 GM2AP17900 193 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 RFC5P40937 340 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 RANBP1P43487 201 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 PSMC4P43686 418 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 UTP4Q969X6 686 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 UBE2TQ9NPD8 197 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 CCND1P24385 295 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 ARHGAP4P98171 946 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 RIPK1Q13546 671 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 LUC7LQ9NQ29 371 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 STK17AQ9UEE5 414 aa16.69■□□□□ 0.26
KCNMA1-219ENST00000480683 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 TTLL1O95922 423 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 LDHCP07864 332 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 MMP13P45452 471 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 USP11P51784 963 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 RAD23BP54727 409 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 COPS2P61201 443 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 MGAT5Q09328 741 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 SSU72P8A0A1W2PR75 194 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 DLATP10515 647 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 NEFHP12036 1026 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 ECE1P42892 770 aa16.68■□□□□ 0.26
KCNMA1-219ENST00000480683 JAG1P78504 1218 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms