RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 C18orf8Q96DM3 657 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 LZTS2Q9BRK4 669 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 KCTD10Q9H3F6 313 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 SAR1AQ9NR31 198 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 GMEB1Q9Y692 573 aa11.44□□□□□ -0.58
SIK3-210ENST00000480468 SMAPO00193 183 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 ENTPD5O75356 428 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 EPHB2P29323 1055 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 BCAMP50895 628 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 OTUD6AQ7L8S5 288 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 GDAP1Q8TB36 358 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 U2AF1L4Q8WU68 220 aaKnown RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 LZICQ8WZA0 190 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 HAPLN3Q96S86 360 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 COMMD3-BMI1R4GMX3 469 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 PASKQ96RG2 1323 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 USP17L21D6R901 530 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 H0Y3Z8 333 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 GH1P01241 217 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 ACTN1P12814 892 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 SLC9A1P19634 815 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 GNA11P29992 359 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 COPB2P35606 906 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 CEBPAP49715 358 aaPredicted RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 RNASELQ05823 741 aaKnown RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 AP1B1Q10567 949 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 MYBPC3Q14896 1274 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 CCDC6Q16204 474 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 STKLD1Q8NE28 680 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 OLIG1Q8TAK6 271 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 SCG3Q8WXD2 468 aaKnown RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 ZCWPW1Q9H0M4 648 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 DDX43Q9NXZ2 648 aaKnown RBP11.43□□□□□ -0.58
SIK3-210ENST00000480468 WHRNQ9P202 907 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 PCDHA2Q9Y5H9 948 aa11.43□□□□□ -0.58
SIK3-210ENST00000480468 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 ADAMTSL3P82987 1691 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 FOXN2P32314 431 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SERPINB4P48594 390 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SLC18A1P54219 525 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SLC34A1Q06495 639 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 TCEAL1Q15170 157 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SBK1Q52WX2 424 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 FAM47AQ5JRC9 791 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 KRT79Q5XKE5 535 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 TTC27Q6P3X3 843 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 CCDC137Q6PK04 289 aaKnown RBP11.42□□□□□ -0.58
SIK3-210ENST00000480468 DNAAF5Q86Y56 855 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 PPFIBP2Q8ND30 876 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 CTNNBL1Q8WYA6 563 aaPredicted RBP11.42□□□□□ -0.58
SIK3-210ENST00000480468 ALG3Q92685 438 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 NT5C3AQ9H0P0 336 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 SIX2Q9NPC8 291 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 OSGEPQ9NPF4 335 aa11.42□□□□□ -0.58
SIK3-210ENST00000480468 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
SIK3-210ENST00000480468 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
SIK3-210ENST00000480468 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 TXKP42681 527 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CALCOCO2Q13137 446 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 EPHA7Q15375 998 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CALCRLQ16602 461 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 KHDC1Q4VXA5 237 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 SLC45A4Q5BKX6 768 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 C11orf63Q6NUN7 778 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 CCDC65Q8IXS2 484 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 UBL4BQ8N7F7 174 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 C12orf50Q8NA57 414 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 ZNF398Q8TD17 642 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 SLCO2A1Q92959 643 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 DHX36Q9H2U1 1008 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 DNAAF2Q9NVR5 837 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 IL1RAPL1Q9NZN1 696 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 STX18Q9P2W9 335 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ZNF804BA4D1E1 1349 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CYTH3O43739 400 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CDH16O75309 829 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 TTC4O95801 387 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 PLCG2P16885 1265 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 MUTP22033 750 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 COILP38432 576 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms