RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 ZNF280BQ86YH2 543 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 DIS3L2Q8IYB7 885 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 EXOC8Q8IYI6 725 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 MRPL43Q8N983 215 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 TMEM87AQ8NBN3 555 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 NSUN7Q8NE18 718 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 URGCPQ8TCY9 931 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 ASAP3Q8TDY4 903 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 TCP11Q8WWU5 503 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 CASP10Q92851 521 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 IGSF21Q96ID5 467 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 EIF2AK1Q9BQI3 630 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 ZBP1Q9H171 429 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 ZSWIM4Q9H7M6 989 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 RSAD1Q9HA92 442 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 XPNPEP1Q9NQW7 623 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 PPP4R2Q9NY27 417 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 PPME1Q9Y570 386 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 MYO10Q9HD67 2058 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 C2orf16Q68DN1 1984 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 POTEMA6NI47 508 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 SPDYE4A6NLX3 237 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 BTBD18B2RXH4 712 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 INO80B-WBP1J3KQ70 363 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 TSPAN1O60635 241 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 USO1O60763 962 aaKnown RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 ZNF623O75123 536 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 DDHD2O94830 711 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CXCL14O95715 111 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 POMCP01189 267 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 GALTP07902 379 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CTSAP10619 480 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 EPCAMP16422 314 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 HOXA11P31270 313 aaPredicted RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 MLH1P40692 756 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 TXKP42681 527 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 NEK4P51957 841 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 ST3GAL1Q11201 340 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CAPSQ13938 189 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 TFDP1Q14186 410 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 BMS1Q14692 1282 aaKnown RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 PTPN21Q16825 1174 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CES5AQ6NT32 575 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 KANK3Q6NY19 840 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 DDX53Q86TM3 631 aaKnown RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 C12orf76Q8N812 135 aaPredicted RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 PBXIP1Q96AQ6 731 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CPB2Q96IY4 423 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 MFSD14AQ96MC6 490 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 FBXL18Q96ME1 805 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 FAM193BQ96PV7 902 aaPredicted RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 APOL6Q9BWW8 343 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 EIF2AQ9BY44 585 aaKnown RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 POMKQ9H5K3 350 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 TTC12Q9H892 705 aaPredicted RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 PCDHA12Q9UN75 941 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 PRG3Q9Y2Y8 225 aaPredicted RBP7.44□□□□□ -1.22
FN1-220ENST00000480024 HES2Q9Y543 173 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 PLXNA3P51805 1871 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 CNTNAP2Q9UHC6 1331 aa7.44□□□□□ -1.22
FN1-220ENST00000480024 A0A087WWV3 80 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 CARNS1A5YM72 827 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 C2CD4DB7Z1M9 353 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 C2CD2LO14523 706 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 ASAP2O43150 1006 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 B4GALT5O43286 388 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 SLITRK3O94933 977 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 ITGA4P13612 1032 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 NCLP19338 710 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 MCM7P33993 719 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 RARRES1P49788 294 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 GUCY1B3Q02153 619 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 NHLH1Q02575 133 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 MBTD1Q05BQ5 628 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 ITIH3Q06033 890 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 SIGLEC14Q08ET2 396 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 MXD4Q14582 209 aaPredicted RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 PTPN14Q15678 1187 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 NOTUMQ6P988 496 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 MRPL10Q7Z7H8 261 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 CABP7Q86V35 215 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 SUGP1Q8IWZ8 645 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 TDRD5Q8NAT2 981 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 SMG8Q8ND04 991 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 FEZF2Q8TBJ5 459 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 PIGOQ8TEQ8 1089 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 NECTIN4Q96NY8 510 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 HSD17B14Q9BPX1 270 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 TRIM6Q9C030 488 aaPredicted RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 POLR3FQ9H1D9 316 aaPredicted RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 ADAM7Q9H2U9 754 aa7.43□□□□□ -1.22
FN1-220ENST00000480024 NXF3Q9H4D5 531 aaKnown RBP7.43□□□□□ -1.22
FN1-220ENST00000480024 DZANK1Q9NVP4 752 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms