RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 GDAP1L1Q96MZ0 367 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 TMEM117Q9H0C3 514 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 SEPT9Q9UHD8 586 aaPredicted RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 P4HA2O15460 535 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 N4BP1O75113 896 aaKnown RBP14.11□□□□□ -0.15
SEC13-216ENST00000479868 STAM2O75886 525 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 ZNF526Q8TF50 670 aaPredicted RBP14.11□□□□□ -0.15
SEC13-216ENST00000479868 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
SEC13-216ENST00000479868 RNF14Q9UBS8 474 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 INTUQ9ULD6 942 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 EXOC7Q9UPT5 735 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 RFX1P22670 979 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 MXI1P50539 228 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 RNASE9P60153 205 aaKnown RBP14.11□□□□□ -0.15
SEC13-216ENST00000479868 CETN1Q12798 172 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 KIF22Q14807 665 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
SEC13-216ENST00000479868 SPIRE2Q8WWL2 714 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.153e-6■■■■□ 24.2
SEC13-216ENST00000479868 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 TAS2R14Q9NYV8 317 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 DAAM1Q9Y4D1 1078 aa14.11□□□□□ -0.15
SEC13-216ENST00000479868 A0A0A6YYK5 440 aaPredicted RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 DGAT1O75907 488 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 KIF4AO95239 1232 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 RPS6KA1Q15418 735 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 IFI16Q16666 785 aaKnown RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 LBX2Q6XYB7 198 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 CYFIP1Q7L576 1253 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 KAT5Q92993 513 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 HVCN1Q96D96 273 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 POP1Q99575 1024 aaKnown RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 BTBD7Q9P203 1132 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 PAPPA2Q9BXP8 1791 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 IGSF9BQ9UPX0 1349 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 ADM5C9JUS6 153 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 KCNK3O14649 394 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
SEC13-216ENST00000479868 CCDC172P0C7W6 258 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 TNNT3P45378 269 aaPredicted RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 MCCD1P59942 119 aaPredicted RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 MAP2K1Q02750 393 aaPredicted RBP14.1□□□□□ -0.15
SEC13-216ENST00000479868 STXBP2Q15833 593 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 CHST13Q8NET6 341 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 SLC20A1Q8WUM9 679 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 CCDC127Q96BQ5 260 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 C17orf75Q9HAS0 396 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 OSGEPQ9NPF4 335 aa14.1□□□□□ -0.15
SEC13-216ENST00000479868 EIF3JO75822 258 aaKnown RBP14.09□□□□□ -0.15
SEC13-216ENST00000479868 SUPT20HL2P0C7V6 817 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 ZBTB48P10074 688 aaPredicted RBP14.09□□□□□ -0.15
SEC13-216ENST00000479868 ATP4AP20648 1035 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 ABCB4P21439 1286 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 MTERF2Q49AM1 385 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 C8orf74Q6P047 294 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 MIS18BP1Q6P0N0 1132 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 TAS1R3Q7RTX0 852 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SLFN11Q7Z7L1 901 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 FMNL3Q8IVF7 1028 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 PARD3BQ8TEW8 1205 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SEPT11Q9NVA2 429 aaKnown RBP14.09□□□□□ -0.15
SEC13-216ENST00000479868 STIM2Q9P246 746 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 A0A0G2JMZ2 1700 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 PMM2O15305 246 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 TNFAIP3P21580 790 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SEPT14Q6ZU15 432 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 DAAM2Q86T65 1068 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SLC35G2Q8TBE7 412 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 TAF4BQ92750 862 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SEMA4DQ92854 862 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 SELENOOQ9BVL4 669 aa14.09□□□□□ -0.15
SEC13-216ENST00000479868 POLR3FQ9H1D9 316 aaPredicted RBP14.09□□□□□ -0.15
SEC13-216ENST00000479868 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
SEC13-216ENST00000479868 NCANO14594 1321 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 HNRNPDLO14979 420 aaKnown RBP14.08□□□□□ -0.16
SEC13-216ENST00000479868 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
SEC13-216ENST00000479868 GYS2P54840 703 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 AENQ8WTP8 325 aaKnown RBP14.08□□□□□ -0.16
SEC13-216ENST00000479868 POMGNT1Q8WZA1 660 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 ARHGEF26Q96DR7 871 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 FBXL18Q96ME1 805 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 AGPAT1Q99943 283 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 MAF1Q9H063 256 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 STXBP5LQ9Y2K9 1186 aa14.08□□□□□ -0.16
SEC13-216ENST00000479868 ICAM3P32942 547 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms